Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.14□□□□□ -1.59
VSX2P58304 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VSX2P58304 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
VSX2P58304 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
VSX2P58304 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VSX2P58304 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
VSX2P58304 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VSX2P58304 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VSX2P58304 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VSX2P58304 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VSX2P58304 AC093849.1-201ENST00000563631 2209 ntBASIC5.14□□□□□ -1.59
VSX2P58304 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VSX2P58304 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.14□□□□□ -1.59
VSX2P58304 RN7SKP185-201ENST00000362813 326 ntBASIC5.14□□□□□ -1.59
VSX2P58304 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
VSX2P58304 RNU6-171P-201ENST00000384354 107 ntBASIC5.14□□□□□ -1.59
VSX2P58304 RNU1-149P-201ENST00000390870 161 ntBASIC5.14□□□□□ -1.59
VSX2P58304 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
VSX2P58304 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.14□□□□□ -1.59
VSX2P58304 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.14□□□□□ -1.59
VSX2P58304 RPS11P7-201ENST00000442125 465 ntBASIC5.14□□□□□ -1.59
VSX2P58304 GAPDHP25-201ENST00000447061 1001 ntBASIC5.14□□□□□ -1.59
VSX2P58304 MYO5BP2-201ENST00000449815 1277 ntBASIC5.14□□□□□ -1.59
VSX2P58304 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.14□□□□□ -1.59
VSX2P58304 COPS8P2-201ENST00000473228 627 ntBASIC5.14□□□□□ -1.59
VSX2P58304 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.14□□□□□ -1.59
VSX2P58304 RNU6-941P-201ENST00000516346 108 ntBASIC5.14□□□□□ -1.59
VSX2P58304 AC027308.1-201ENST00000517993 110 ntBASIC5.14□□□□□ -1.59
VSX2P58304 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.14□□□□□ -1.59
VSX2P58304 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.14□□□□□ -1.59
VSX2P58304 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.14□□□□□ -1.59
VSX2P58304 AL359219.2-201ENST00000555184 348 ntBASIC5.14□□□□□ -1.59
VSX2P58304 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.14□□□□□ -1.59
VSX2P58304 RPL10P14-201ENST00000565265 298 ntBASIC5.14□□□□□ -1.59
VSX2P58304 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.14□□□□□ -1.59
VSX2P58304 AC013244.1-201ENST00000604279 193 ntBASIC5.14□□□□□ -1.59
VSX2P58304 AL139124.1-201ENST00000609123 421 ntBASIC5.14□□□□□ -1.59
VSX2P58304 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.14□□□□□ -1.59
VSX2P58304 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.14□□□□□ -1.59
VSX2P58304 AC005618.4-201ENST00000625053 554 ntBASIC5.14□□□□□ -1.59
VSX2P58304 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VSX2P58304 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VSX2P58304 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VSX2P58304 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VSX2P58304 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.14□□□□□ -1.59
VSX2P58304 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
VSX2P58304 AC007938.2-201ENST00000604666 2634 ntBASIC5.13□□□□□ -1.59
VSX2P58304 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
VSX2P58304 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VSX2P58304 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
VSX2P58304 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VSX2P58304 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VSX2P58304 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VSX2P58304 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VSX2P58304 AL078621.3-201ENST00000623707 2042 ntBASIC5.13□□□□□ -1.59
VSX2P58304 AC002525.1-201ENST00000624392 1622 ntBASIC5.13□□□□□ -1.59
VSX2P58304 AC010266.2-201ENST00000564741 3255 ntBASIC5.13□□□□□ -1.59
VSX2P58304 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.13□□□□□ -1.59
VSX2P58304 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VSX2P58304 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VSX2P58304 OR9K1P-201ENST00000326513 941 ntBASIC5.13□□□□□ -1.59
VSX2P58304 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VSX2P58304 PPIAP9-201ENST00000403866 498 ntBASIC5.13□□□□□ -1.59
VSX2P58304 MIR1178-201ENST00000408396 91 ntBASIC5.13□□□□□ -1.59
VSX2P58304 RNA5SP487-201ENST00000410186 122 ntBASIC5.13□□□□□ -1.59
VSX2P58304 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.13□□□□□ -1.59
VSX2P58304 AL133482.1-201ENST00000415988 498 ntBASIC5.13□□□□□ -1.59
VSX2P58304 BMS1P13-201ENST00000417301 885 ntBASIC5.13□□□□□ -1.59
VSX2P58304 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.13□□□□□ -1.59
VSX2P58304 SLC35E1P1-201ENST00000419313 864 ntBASIC5.13□□□□□ -1.59
VSX2P58304 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.13□□□□□ -1.59
VSX2P58304 LYPLA1P1-201ENST00000434514 622 ntBASIC5.13□□□□□ -1.59
VSX2P58304 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.13□□□□□ -1.59
VSX2P58304 RN7SL30P-201ENST00000488416 306 ntBASIC5.13□□□□□ -1.59
VSX2P58304 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.13□□□□□ -1.59
VSX2P58304 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.13□□□□□ -1.59
VSX2P58304 AC008638.1-201ENST00000506035 866 ntBASIC5.13□□□□□ -1.59
VSX2P58304 AC091912.1-201ENST00000511351 248 ntBASIC5.13□□□□□ -1.59
VSX2P58304 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.13□□□□□ -1.59
VSX2P58304 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.13□□□□□ -1.59
VSX2P58304 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.13□□□□□ -1.59
VSX2P58304 RNA5SP34-201ENST00000516887 130 ntBASIC5.13□□□□□ -1.59
VSX2P58304 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.13□□□□□ -1.59
VSX2P58304 CDC42P3-201ENST00000518493 633 ntBASIC5.13□□□□□ -1.59
VSX2P58304 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.13□□□□□ -1.59
VSX2P58304 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.13□□□□□ -1.59
VSX2P58304 OR11H3P-201ENST00000554547 982 ntBASIC5.13□□□□□ -1.59
VSX2P58304 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.13□□□□□ -1.59
VSX2P58304 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VSX2P58304 AC009237.13-201ENST00000603193 276 ntBASIC5.13□□□□□ -1.59
VSX2P58304 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.13□□□□□ -1.59
VSX2P58304 uc_338.7-201ENST00000621834 124 ntBASIC5.13□□□□□ -1.59
VSX2P58304 AC135068.5-201ENST00000624197 983 ntBASIC5.13□□□□□ -1.59
VSX2P58304 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.13□□□□□ -1.59
VSX2P58304 CYP4F35P-202ENST00000636121 390 ntBASIC5.13□□□□□ -1.59
VSX2P58304 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VSX2P58304 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VSX2P58304 AC235565.1-201ENST00000456962 1325 ntBASIC5.13□□□□□ -1.59
VSX2P58304 PABPC1P6-201ENST00000445594 1829 ntBASIC5.13□□□□□ -1.59
VSX2P58304 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms