Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 NMNAT1P5-201ENST00000559657 841 ntBASIC5.48□□□□□ -1.53
CDH4P55283 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.48□□□□□ -1.53
CDH4P55283 Z95327.3-201ENST00000610385 572 ntBASIC5.48□□□□□ -1.53
CDH4P55283 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH4P55283 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CDH4P55283 CYP4F35P-202ENST00000636121 390 ntBASIC5.48□□□□□ -1.53
CDH4P55283 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CDH4P55283 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CDH4P55283 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH4P55283 ABCC13-202ENST00000463099 3842 ntBASIC5.48□□□□□ -1.53
CDH4P55283 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH4P55283 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH4P55283 AC016745.2-201ENST00000608834 3443 ntBASIC5.48□□□□□ -1.53
CDH4P55283 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH4P55283 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH4P55283 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
CDH4P55283 AC003973.3-201ENST00000624863 2822 ntBASIC5.47□□□□□ -1.53
CDH4P55283 PROS2P-201ENST00000474651 1951 ntBASIC5.47□□□□□ -1.53
CDH4P55283 AL031595.2-201ENST00000624215 19071 ntBASIC5.47□□□□□ -1.53
CDH4P55283 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH4P55283 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CDH4P55283 OR9K1P-201ENST00000326513 941 ntBASIC5.47□□□□□ -1.53
CDH4P55283 RNU6-171P-201ENST00000384354 107 ntBASIC5.47□□□□□ -1.53
CDH4P55283 MIR105-1-201ENST00000385222 81 ntBASIC5.47□□□□□ -1.53
CDH4P55283 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CDH4P55283 AC009506.2-201ENST00000420635 840 ntBASIC5.47□□□□□ -1.53
CDH4P55283 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 RPL5P2-201ENST00000429598 854 ntBASIC5.47□□□□□ -1.53
CDH4P55283 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH4P55283 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH4P55283 RPL12P18-201ENST00000437175 325 ntBASIC5.47□□□□□ -1.53
CDH4P55283 AC104634.1-201ENST00000452720 462 ntBASIC5.47□□□□□ -1.53
CDH4P55283 AC104849.1-201ENST00000462623 405 ntBASIC5.47□□□□□ -1.53
CDH4P55283 AP000797.2-201ENST00000475768 606 ntBASIC5.47□□□□□ -1.53
CDH4P55283 NPM1P28-201ENST00000492269 840 ntBASIC5.47□□□□□ -1.53
CDH4P55283 AC015864.1-201ENST00000496512 544 ntBASIC5.47□□□□□ -1.53
CDH4P55283 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH4P55283 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH4P55283 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH4P55283 HMGN1P9-201ENST00000515212 298 ntBASIC5.47□□□□□ -1.53
CDH4P55283 AC097486.1-201ENST00000515331 210 ntBASIC5.47□□□□□ -1.53
CDH4P55283 SEPT10P1-201ENST00000517342 1162 ntBASIC5.47□□□□□ -1.53
CDH4P55283 IGLV2-28-201ENST00000520681 304 ntBASIC5.47□□□□□ -1.53
CDH4P55283 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CDH4P55283 AC010547.7-201ENST00000570323 333 ntBASIC5.47□□□□□ -1.53
CDH4P55283 AC108738.1-201ENST00000603703 237 ntBASIC5.47□□□□□ -1.53
CDH4P55283 AL356608.1-201ENST00000610034 820 ntBASIC5.47□□□□□ -1.53
CDH4P55283 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.47□□□□□ -1.53
CDH4P55283 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH4P55283 AC099654.6-201ENST00000636487 512 ntBASIC5.47□□□□□ -1.53
CDH4P55283 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 AC079298.1-201ENST00000625026 1619 ntBASIC5.47□□□□□ -1.53
CDH4P55283 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CDH4P55283 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH4P55283 AL590763.1-201ENST00000398297 1545 ntBASIC5.47□□□□□ -1.53
CDH4P55283 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CDH4P55283 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CDH4P55283 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH4P55283 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
CDH4P55283 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CDH4P55283 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
CDH4P55283 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH4P55283 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH4P55283 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.46□□□□□ -1.53
CDH4P55283 AC093849.1-201ENST00000563631 2209 ntBASIC5.46□□□□□ -1.54
CDH4P55283 AC011493.1-201ENST00000596753 1632 ntBASIC5.46□□□□□ -1.54
CDH4P55283 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH4P55283 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH4P55283 U3.2-201ENST00000362981 210 ntBASIC5.46□□□□□ -1.54
CDH4P55283 U3.7-201ENST00000363668 216 ntBASIC5.46□□□□□ -1.54
CDH4P55283 SNORA70.6-201ENST00000383934 134 ntBASIC5.46□□□□□ -1.54
CDH4P55283 MIR1178-201ENST00000408396 91 ntBASIC5.46□□□□□ -1.54
CDH4P55283 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH4P55283 AC017019.1-201ENST00000426129 261 ntBASIC5.46□□□□□ -1.54
CDH4P55283 NANOGP4-201ENST00000427230 913 ntBASIC5.46□□□□□ -1.54
CDH4P55283 CNOT7P2-201ENST00000441051 832 ntBASIC5.46□□□□□ -1.54
CDH4P55283 AC245047.2-201ENST00000441060 530 ntBASIC5.46□□□□□ -1.54
CDH4P55283 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.46□□□□□ -1.54
CDH4P55283 AC079841.1-201ENST00000481228 950 ntBASIC5.46□□□□□ -1.54
CDH4P55283 RN7SL214P-201ENST00000487317 265 ntBASIC5.46□□□□□ -1.54
CDH4P55283 AC072052.1-201ENST00000496556 306 ntBASIC5.46□□□□□ -1.54
CDH4P55283 RPS24P16-201ENST00000497294 392 ntBASIC5.46□□□□□ -1.54
CDH4P55283 IGBP1P4-201ENST00000503202 879 ntBASIC5.46□□□□□ -1.54
CDH4P55283 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.46□□□□□ -1.54
CDH4P55283 RPS4XP20-201ENST00000505751 772 ntBASIC5.46□□□□□ -1.54
CDH4P55283 HIGD1AP14-201ENST00000507617 282 ntBASIC5.46□□□□□ -1.54
CDH4P55283 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH4P55283 AC022360.1-201ENST00000521058 340 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms