Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.68□□□□□ -1.5
LIMK1P53667 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.68□□□□□ -1.5
LIMK1P53667 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.68□□□□□ -1.5
LIMK1P53667 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.68□□□□□ -1.5
LIMK1P53667 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.68□□□□□ -1.5
LIMK1P53667 TXNP4-201ENST00000575018 310 ntBASIC5.68□□□□□ -1.5
LIMK1P53667 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.68□□□□□ -1.5
LIMK1P53667 AC016911.1-201ENST00000613297 452 ntBASIC5.68□□□□□ -1.5
LIMK1P53667 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.68□□□□□ -1.5
LIMK1P53667 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.68□□□□□ -1.5
LIMK1P53667 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.68□□□□□ -1.5
LIMK1P53667 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.68□□□□□ -1.5
LIMK1P53667 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LIMK1P53667 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LIMK1P53667 VPS35P1-201ENST00000563400 1518 ntBASIC5.68□□□□□ -1.5
LIMK1P53667 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LIMK1P53667 SOCS5P3-201ENST00000425115 1576 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LIMK1P53667 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
LIMK1P53667 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LIMK1P53667 AC003973.3-201ENST00000624863 2822 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.67□□□□□ -1.5
LIMK1P53667 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.67□□□□□ -1.5
LIMK1P53667 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.67□□□□□ -1.5
LIMK1P53667 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.67□□□□□ -1.5
LIMK1P53667 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LIMK1P53667 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.67□□□□□ -1.5
LIMK1P53667 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LIMK1P53667 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.67□□□□□ -1.5
LIMK1P53667 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LIMK1P53667 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LIMK1P53667 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LIMK1P53667 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LIMK1P53667 MTND3P20-201ENST00000407663 186 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 RMRPP5-201ENST00000411156 267 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 AC099677.3-201ENST00000427081 395 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.67□□□□□ -1.5
LIMK1P53667 PSMD10P3-201ENST00000437000 448 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.67□□□□□ -1.5
LIMK1P53667 AC245047.2-201ENST00000441060 530 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 AL591623.2-201ENST00000449978 222 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 AC009220.1-201ENST00000451614 275 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.67□□□□□ -1.5
LIMK1P53667 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.67□□□□□ -1.5
LIMK1P53667 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.67□□□□□ -1.5
LIMK1P53667 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.67□□□□□ -1.5
LIMK1P53667 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.67□□□□□ -1.5
LIMK1P53667 AC005000.1-201ENST00000536192 288 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LIMK1P53667 AC244502.2-201ENST00000543361 851 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.67□□□□□ -1.5
LIMK1P53667 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.67□□□□□ -1.5
LIMK1P53667 CD24P2-201ENST00000565486 219 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 OR1F2P-201ENST00000570470 933 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 MIR4697-201ENST00000582977 78 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.67□□□□□ -1.5
LIMK1P53667 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.67□□□□□ -1.5
LIMK1P53667 FAM60CP-201ENST00000591086 664 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.67□□□□□ -1.5
LIMK1P53667 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.67□□□□□ -1.5
LIMK1P53667 AC009163.6-201ENST00000612367 342 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 WBP1LP8-201ENST00000617401 327 ntBASIC5.67□□□□□ -1.5
LIMK1P53667 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.67□□□□□ -1.5
LIMK1P53667 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LIMK1P53667 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.67□□□□□ -1.5
LIMK1P53667 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LIMK1P53667 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LIMK1P53667 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LIMK1P53667 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LIMK1P53667 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LIMK1P53667 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK1P53667 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
LIMK1P53667 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK1P53667 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.66□□□□□ -1.5
LIMK1P53667 HSPA8P18-201ENST00000439846 1928 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LIMK1P53667 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.66□□□□□ -1.5
LIMK1P53667 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.66□□□□□ -1.5
LIMK1P53667 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK1P53667 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK1P53667 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK1P53667 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.66□□□□□ -1.5
LIMK1P53667 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.66□□□□□ -1.5
LIMK1P53667 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.66□□□□□ -1.5
LIMK1P53667 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
LIMK1P53667 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.66□□□□□ -1.5
LIMK1P53667 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK1P53667 AC233289.1-201ENST00000403700 508 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 RNU6-564P-201ENST00000410983 104 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 RPS26P13-201ENST00000419030 330 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.66□□□□□ -1.5
LIMK1P53667 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.66□□□□□ -1.5
LIMK1P53667 Z85994.2-201ENST00000434327 452 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 AL392003.1-201ENST00000434394 243 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.66□□□□□ -1.5
LIMK1P53667 AL606490.8-201ENST00000441624 319 ntBASIC5.66□□□□□ -1.5
LIMK1P53667 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.66□□□□□ -1.5
LIMK1P53667 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms