Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC064807.4-201ENST00000607201 407 ntBASIC6.89□□□□□ -1.31
MRE11P49959 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.89□□□□□ -1.31
MRE11P49959 AL589743.6-201ENST00000611025 117 ntBASIC6.89□□□□□ -1.31
MRE11P49959 U6.48-201ENST00000618523 106 ntBASIC6.89□□□□□ -1.31
MRE11P49959 AC074276.2-201ENST00000619891 348 ntBASIC6.89□□□□□ -1.31
MRE11P49959 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.89□□□□□ -1.31
MRE11P49959 AC026422.1-201ENST00000623961 452 ntBASIC6.89□□□□□ -1.31
MRE11P49959 EIF3EP1-201ENST00000433978 1316 ntBASIC6.89□□□□□ -1.31
MRE11P49959 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
MRE11P49959 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
MRE11P49959 AC003985.2-201ENST00000562268 1669 ntBASIC6.89□□□□□ -1.31
MRE11P49959 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.89□□□□□ -1.31
MRE11P49959 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.89□□□□□ -1.31
MRE11P49959 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
MRE11P49959 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.88□□□□□ -1.31
MRE11P49959 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 AC018809.2-201ENST00000602436 3823 ntBASIC6.88□□□□□ -1.31
MRE11P49959 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
MRE11P49959 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
MRE11P49959 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.88□□□□□ -1.31
MRE11P49959 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.88□□□□□ -1.31
MRE11P49959 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
MRE11P49959 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 RNU1-19P-201ENST00000363306 165 ntBASIC6.88□□□□□ -1.31
MRE11P49959 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
MRE11P49959 RPL11P3-201ENST00000395256 523 ntBASIC6.88□□□□□ -1.31
MRE11P49959 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.88□□□□□ -1.31
MRE11P49959 NPM1P48-201ENST00000436002 853 ntBASIC6.88□□□□□ -1.31
MRE11P49959 ELOCP11-201ENST00000436690 332 ntBASIC6.88□□□□□ -1.31
MRE11P49959 ELOCP16-201ENST00000444494 332 ntBASIC6.88□□□□□ -1.31
MRE11P49959 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.88□□□□□ -1.31
MRE11P49959 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.88□□□□□ -1.31
MRE11P49959 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.88□□□□□ -1.31
MRE11P49959 AC020898.1-201ENST00000474167 787 ntBASIC6.88□□□□□ -1.31
MRE11P49959 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.88□□□□□ -1.31
MRE11P49959 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 EIF3LP3-201ENST00000495197 822 ntBASIC6.88□□□□□ -1.31
MRE11P49959 AL136038.1-201ENST00000497246 351 ntBASIC6.88□□□□□ -1.31
MRE11P49959 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.88□□□□□ -1.31
MRE11P49959 MTCO3P27-201ENST00000514397 196 ntBASIC6.88□□□□□ -1.31
MRE11P49959 RN7SKP288-201ENST00000516227 268 ntBASIC6.88□□□□□ -1.31
MRE11P49959 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.88□□□□□ -1.31
MRE11P49959 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.88□□□□□ -1.31
MRE11P49959 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.88□□□□□ -1.31
MRE11P49959 MTND2P17-201ENST00000550281 688 ntBASIC6.88□□□□□ -1.31
MRE11P49959 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.88□□□□□ -1.31
MRE11P49959 AC044860.2-201ENST00000561005 179 ntBASIC6.88□□□□□ -1.31
MRE11P49959 AC007346.2-201ENST00000564816 892 ntBASIC6.88□□□□□ -1.31
MRE11P49959 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.88□□□□□ -1.31
MRE11P49959 AC106052.1-201ENST00000608029 497 ntBASIC6.88□□□□□ -1.31
MRE11P49959 AL445528.2-201ENST00000620582 470 ntBASIC6.88□□□□□ -1.31
MRE11P49959 AC007275.1-201ENST00000621243 671 ntBASIC6.88□□□□□ -1.31
MRE11P49959 AC018445.2-201ENST00000622987 260 ntBASIC6.88□□□□□ -1.31
MRE11P49959 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC6.88□□□□□ -1.31
MRE11P49959 AP003399.1-201ENST00000637534 361 ntBASIC6.88□□□□□ -1.31
MRE11P49959 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
MRE11P49959 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
MRE11P49959 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
MRE11P49959 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.88□□□□□ -1.31
MRE11P49959 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
MRE11P49959 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.88□□□□□ -1.31
MRE11P49959 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
MRE11P49959 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
MRE11P49959 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
MRE11P49959 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
MRE11P49959 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
MRE11P49959 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.87□□□□□ -1.31
MRE11P49959 AC093225.1-201ENST00000506867 1408 ntBASIC6.87□□□□□ -1.31
MRE11P49959 AC130304.1-201ENST00000622942 2385 ntBASIC6.87□□□□□ -1.31
MRE11P49959 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.87□□□□□ -1.31
MRE11P49959 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.87□□□□□ -1.31
MRE11P49959 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
MRE11P49959 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
MRE11P49959 SNORD51.1-201ENST00000365405 77 ntBASIC6.87□□□□□ -1.31
MRE11P49959 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.87□□□□□ -1.31
MRE11P49959 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms