Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN9P43378 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN9P43378 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.8□□□□□ -1.48
PTPN9P43378 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN9P43378 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN9P43378 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PTPN9P43378 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTPN9P43378 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN9P43378 AL592494.2-201ENST00000425455 1548 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN9P43378 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN9P43378 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTPN9P43378 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN9P43378 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PTPN9P43378 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN9P43378 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN9P43378 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PTPN9P43378 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN9P43378 AC012078.1-201ENST00000405035 1646 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 AC110792.3-201ENST00000595906 1614 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN9P43378 SNORD115-48-201ENST00000364764 76 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 RNU6-609P-201ENST00000365459 107 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN9P43378 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PTPN9P43378 RNU6-40P-201ENST00000384254 107 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 RNA5SP122-201ENST00000384457 108 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 MIR551A-201ENST00000385042 96 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTPN9P43378 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN9P43378 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN9P43378 CDY17P-201ENST00000414121 1282 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.79□□□□□ -1.48
PTPN9P43378 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 MTND2P9-201ENST00000422293 931 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 HSFY1P1-201ENST00000423928 1178 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 MTCO1P51-201ENST00000427672 1060 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 AC079807.1-201ENST00000429993 481 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 AL606490.7-201ENST00000433136 191 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 FMO7P-201ENST00000436045 768 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 EEF1B2P6-201ENST00000445713 673 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 AC023271.1-201ENST00000445936 1090 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 HMGN1P36-201ENST00000446623 298 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 AL358876.1-201ENST00000453364 1075 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 RN7SL72P-201ENST00000460697 269 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 PSAT1P4-201ENST00000466500 526 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN9P43378 NPM1P28-201ENST00000492269 840 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN9P43378 AC021106.1-201ENST00000509020 1058 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 AC109481.1-201ENST00000509173 282 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 AC090568.1-201ENST00000509499 856 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 HMGB1P47-201ENST00000511281 589 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.79□□□□□ -1.48
PTPN9P43378 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN9P43378 AL049872.1-201ENST00000556323 322 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.79□□□□□ -1.48
PTPN9P43378 AC092868.3-201ENST00000560515 784 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.79□□□□□ -1.48
PTPN9P43378 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN9P43378 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN9P43378 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN9P43378 AC008115.3-201ENST00000614874 549 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 AL590396.2-201ENST00000636511 1041 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN9P43378 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PTPN9P43378 BCORP1-203ENST00000513194 5093 ntBASIC5.79□□□□□ -1.48
PTPN9P43378 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN9P43378 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN9P43378 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN9P43378 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN9P43378 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN9P43378 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
PTPN9P43378 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN9P43378 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN9P43378 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN9P43378 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
PTPN9P43378 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN9P43378 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PTPN9P43378 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN9P43378 MTHFD2P5-201ENST00000320415 844 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN9P43378 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 AL031985.1-201ENST00000392713 418 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 RPSAP35-201ENST00000413753 818 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.78□□□□□ -1.48
PTPN9P43378 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.78□□□□□ -1.48
PTPN9P43378 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 AC007000.2-201ENST00000442564 487 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 RPL31P15-201ENST00000449770 338 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.78□□□□□ -1.48
PTPN9P43378 AP002345.1-201ENST00000456493 928 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 RPS27AP2-201ENST00000457576 465 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 CABYRP1-201ENST00000465493 1045 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 AC093663.2-201ENST00000484625 313 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 AC015864.1-201ENST00000496512 544 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms