Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 OR8K2P-201ENST00000524645 927 ntBASIC5.75□□□□□ -1.49
HADHAP40939 OR4A43P-201ENST00000532938 908 ntBASIC5.75□□□□□ -1.49
HADHAP40939 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HADHAP40939 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.75□□□□□ -1.49
HADHAP40939 AC068305.2-201ENST00000550567 1205 ntBASIC5.75□□□□□ -1.49
HADHAP40939 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.75□□□□□ -1.49
HADHAP40939 LINC00557-201ENST00000563184 1279 ntBASIC5.75□□□□□ -1.49
HADHAP40939 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.75□□□□□ -1.49
HADHAP40939 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.75□□□□□ -1.49
HADHAP40939 MIR3614-201ENST00000581261 86 ntBASIC5.75□□□□□ -1.49
HADHAP40939 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.75□□□□□ -1.49
HADHAP40939 AL022394.1-201ENST00000606979 292 ntBASIC5.75□□□□□ -1.49
HADHAP40939 AC090607.5-201ENST00000615692 224 ntBASIC5.75□□□□□ -1.49
HADHAP40939 AC073592.7-201ENST00000623659 507 ntBASIC5.75□□□□□ -1.49
HADHAP40939 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.75□□□□□ -1.49
HADHAP40939 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.75□□□□□ -1.49
HADHAP40939 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HADHAP40939 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HADHAP40939 CASC19-281ENST00000642118 1554 ntBASIC5.75□□□□□ -1.49
HADHAP40939 AC007342.7-201ENST00000624610 2337 ntBASIC5.75□□□□□ -1.49
HADHAP40939 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.75□□□□□ -1.49
HADHAP40939 KARSP1-201ENST00000451871 1752 ntBASIC5.75□□□□□ -1.49
HADHAP40939 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HADHAP40939 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HADHAP40939 AC006484.1-201ENST00000435086 1884 ntBASIC5.75□□□□□ -1.49
HADHAP40939 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.75□□□□□ -1.49
HADHAP40939 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.75□□□□□ -1.49
HADHAP40939 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.75□□□□□ -1.49
HADHAP40939 AL022311.1-201ENST00000623726 19416 ntBASIC5.75□□□□□ -1.49
HADHAP40939 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.74□□□□□ -1.49
HADHAP40939 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.74□□□□□ -1.49
HADHAP40939 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HADHAP40939 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.74□□□□□ -1.49
HADHAP40939 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.74□□□□□ -1.49
HADHAP40939 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 AC092681.1-201ENST00000297369 291 ntBASIC5.74□□□□□ -1.49
HADHAP40939 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HADHAP40939 NIFKP3-201ENST00000417799 865 ntBASIC5.74□□□□□ -1.49
HADHAP40939 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.74□□□□□ -1.49
HADHAP40939 AL022331.1-201ENST00000429025 477 ntBASIC5.74□□□□□ -1.49
HADHAP40939 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.74□□□□□ -1.49
HADHAP40939 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.74□□□□□ -1.49
HADHAP40939 AC083899.1-201ENST00000454465 3819 ntBASIC5.74□□□□□ -1.49
HADHAP40939 HSPE1P22-201ENST00000456856 327 ntBASIC5.74□□□□□ -1.49
HADHAP40939 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.74□□□□□ -1.49
HADHAP40939 PSAT1P4-201ENST00000466500 526 ntBASIC5.74□□□□□ -1.49
HADHAP40939 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.74□□□□□ -1.49
HADHAP40939 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.74□□□□□ -1.49
HADHAP40939 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.74□□□□□ -1.49
HADHAP40939 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.74□□□□□ -1.49
HADHAP40939 AC093770.1-201ENST00000511559 571 ntBASIC5.74□□□□□ -1.49
HADHAP40939 AC114781.3-201ENST00000512083 142 ntBASIC5.74□□□□□ -1.49
HADHAP40939 SNORA70.20-201ENST00000516848 126 ntBASIC5.74□□□□□ -1.49
HADHAP40939 SCARNA6.1-201ENST00000516989 238 ntBASIC5.74□□□□□ -1.49
HADHAP40939 AC021678.3-201ENST00000517893 476 ntBASIC5.74□□□□□ -1.49
HADHAP40939 AC139365.2-201ENST00000517972 253 ntBASIC5.74□□□□□ -1.49
HADHAP40939 AC137627.1-201ENST00000545761 289 ntBASIC5.74□□□□□ -1.49
HADHAP40939 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.74□□□□□ -1.49
HADHAP40939 AC096996.1-201ENST00000563813 325 ntBASIC5.74□□□□□ -1.49
HADHAP40939 AC012146.2-201ENST00000576545 416 ntBASIC5.74□□□□□ -1.49
HADHAP40939 AC008521.2-201ENST00000591021 259 ntBASIC5.74□□□□□ -1.49
HADHAP40939 AC010487.1-201ENST00000594408 1172 ntBASIC5.74□□□□□ -1.49
HADHAP40939 AC007786.3-201ENST00000615154 596 ntBASIC5.74□□□□□ -1.49
HADHAP40939 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 AC022919.1-201ENST00000624979 626 ntBASIC5.74□□□□□ -1.49
HADHAP40939 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
HADHAP40939 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HADHAP40939 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HADHAP40939 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HADHAP40939 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.73□□□□□ -1.49
HADHAP40939 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HADHAP40939 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
HADHAP40939 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.73□□□□□ -1.49
HADHAP40939 AC024341.1-201ENST00000526444 1552 ntBASIC5.73□□□□□ -1.49
HADHAP40939 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.73□□□□□ -1.49
HADHAP40939 NEPNP-201ENST00000404786 1371 ntBASIC5.73□□□□□ -1.49
HADHAP40939 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HADHAP40939 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HADHAP40939 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HADHAP40939 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.73□□□□□ -1.49
HADHAP40939 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HADHAP40939 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HADHAP40939 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.73□□□□□ -1.49
HADHAP40939 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HADHAP40939 MIR130A-201ENST00000385274 89 ntBASIC5.73□□□□□ -1.49
HADHAP40939 AL031985.1-201ENST00000392713 418 ntBASIC5.73□□□□□ -1.49
HADHAP40939 AC104297.1-201ENST00000393779 870 ntBASIC5.73□□□□□ -1.49
HADHAP40939 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms