Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.83□□□□□ -1.32
COL15A1P39059 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.83□□□□□ -1.32
COL15A1P39059 AL731537.2-201ENST00000561565 951 ntBASIC6.83□□□□□ -1.32
COL15A1P39059 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.83□□□□□ -1.32
COL15A1P39059 MIR4330-201ENST00000579077 105 ntBASIC6.83□□□□□ -1.32
COL15A1P39059 MIR3934-201ENST00000579806 107 ntBASIC6.83□□□□□ -1.32
COL15A1P39059 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.83□□□□□ -1.32
COL15A1P39059 ELOCP28-201ENST00000590044 317 ntBASIC6.83□□□□□ -1.32
COL15A1P39059 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.83□□□□□ -1.32
COL15A1P39059 AP000769.2-201ENST00000602344 396 ntBASIC6.83□□□□□ -1.32
COL15A1P39059 AC022387.2-201ENST00000604050 448 ntBASIC6.83□□□□□ -1.32
COL15A1P39059 AC087385.3-201ENST00000620477 187 ntBASIC6.83□□□□□ -1.32
COL15A1P39059 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.83□□□□□ -1.32
COL15A1P39059 MIR6810-201ENST00000622701 70 ntBASIC6.83□□□□□ -1.32
COL15A1P39059 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL15A1P39059 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.83□□□□□ -1.32
COL15A1P39059 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.83□□□□□ -1.32
COL15A1P39059 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.83□□□□□ -1.32
COL15A1P39059 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.83□□□□□ -1.32
COL15A1P39059 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL15A1P39059 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.83□□□□□ -1.32
COL15A1P39059 PANDAR-201ENST00000629595 1506 ntBASIC6.83□□□□□ -1.32
COL15A1P39059 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL15A1P39059 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL15A1P39059 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.83□□□□□ -1.32
COL15A1P39059 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL15A1P39059 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL15A1P39059 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL15A1P39059 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL15A1P39059 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL15A1P39059 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COL15A1P39059 RNU1-146P-201ENST00000364015 165 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 SNORA51.8-201ENST00000384234 132 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 RPL26P29-201ENST00000415623 438 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 AC021876.1-201ENST00000425959 359 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.82□□□□□ -1.32
COL15A1P39059 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.82□□□□□ -1.32
COL15A1P39059 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.82□□□□□ -1.32
COL15A1P39059 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
COL15A1P39059 AP002373.2-201ENST00000541631 1060 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 AC084824.2-201ENST00000548906 345 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
COL15A1P39059 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
COL15A1P39059 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.82□□□□□ -1.32
COL15A1P39059 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COL15A1P39059 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
COL15A1P39059 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL15A1P39059 AC016745.2-201ENST00000608834 3443 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL15A1P39059 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL15A1P39059 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.82□□□□□ -1.32
COL15A1P39059 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
COL15A1P39059 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL15A1P39059 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL15A1P39059 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL15A1P39059 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COL15A1P39059 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL15A1P39059 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL15A1P39059 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL15A1P39059 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL15A1P39059 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.82□□□□□ -1.32
COL15A1P39059 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL15A1P39059 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
COL15A1P39059 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.82□□□□□ -1.32
COL15A1P39059 OR6K3-202ENST00000368146 996 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 CYB5AP4-201ENST00000396692 399 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 AL035419.1-201ENST00000397037 564 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL15A1P39059 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.82□□□□□ -1.32
COL15A1P39059 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.82□□□□□ -1.32
COL15A1P39059 IGBP1P3-201ENST00000447449 1000 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.82□□□□□ -1.32
COL15A1P39059 AC092647.2-201ENST00000452998 253 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 MTND2P39-201ENST00000457230 764 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 AC109464.1-201ENST00000511091 819 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.82□□□□□ -1.32
COL15A1P39059 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.82□□□□□ -1.32
COL15A1P39059 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.82□□□□□ -1.32
COL15A1P39059 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.82□□□□□ -1.32
COL15A1P39059 AC134349.2-201ENST00000535136 910 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 YWHABP2-201ENST00000540201 713 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 AC137768.1-201ENST00000549998 553 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.82□□□□□ -1.32
COL15A1P39059 OR11H3P-201ENST00000554547 982 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.82□□□□□ -1.32
COL15A1P39059 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.82□□□□□ -1.32
COL15A1P39059 AC104307.1-201ENST00000616142 196 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 AC099494.2-201ENST00000623371 978 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 AC135068.5-201ENST00000624197 983 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 AC020978.9-201ENST00000624380 1141 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 AP002371.2-201ENST00000624450 503 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 AC132825.8-201ENST00000640783 297 ntBASIC6.82□□□□□ -1.32
COL15A1P39059 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL15A1P39059 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.81□□□□□ -1.32
COL15A1P39059 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL15A1P39059 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL15A1P39059 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL15A1P39059 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.81□□□□□ -1.32
COL15A1P39059 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.81□□□□□ -1.32
COL15A1P39059 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms