Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGCLP35914 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCLP35914 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCLP35914 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HMGCLP35914 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HMGCLP35914 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.34□□□□□ -1.56
HMGCLP35914 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 DDX18P6-201ENST00000450119 1997 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCLP35914 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCLP35914 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HMGCLP35914 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCLP35914 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCLP35914 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCLP35914 AC092642.1-201ENST00000392417 425 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 RN7SKP59-201ENST00000410520 314 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 AC002524.1-201ENST00000411687 547 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 AC093655.2-201ENST00000425735 631 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 CFL1P1-202ENST00000432948 411 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.33□□□□□ -1.56
HMGCLP35914 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.33□□□□□ -1.56
HMGCLP35914 DNAJB5P1-201ENST00000454004 806 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGCLP35914 CBX1P5-201ENST00000475330 559 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 RPL7P40-201ENST00000481703 745 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 AC022133.1-201ENST00000490961 571 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 RPS12P31-201ENST00000491419 398 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGCLP35914 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
HMGCLP35914 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 AC022616.2-201ENST00000523185 300 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGCLP35914 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGCLP35914 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.33□□□□□ -1.56
HMGCLP35914 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGCLP35914 AC115989.2-201ENST00000578640 563 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGCLP35914 FKBP1AP1-201ENST00000594588 318 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 AP003072.5-201ENST00000623872 773 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 AC136428.4-201ENST00000634254 1155 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGCLP35914 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HMGCLP35914 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCLP35914 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCLP35914 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HMGCLP35914 OR55B1P-203ENST00000641518 2602 ntBASIC5.33□□□□□ -1.56
HMGCLP35914 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCLP35914 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCLP35914 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCLP35914 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCLP35914 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCLP35914 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HMGCLP35914 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HMGCLP35914 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HMGCLP35914 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCLP35914 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCLP35914 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HMGCLP35914 RNU6-249P-201ENST00000363016 102 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 RN7SKP269-201ENST00000365545 319 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 AL391361.1-201ENST00000405580 489 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 CBX1P3-201ENST00000413296 527 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 FAM96AP1-201ENST00000430879 482 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 RPL7L1P9-201ENST00000431298 745 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 AC090804.1-201ENST00000448870 490 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.32□□□□□ -1.56
HMGCLP35914 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 AC105420.1-201ENST00000504389 582 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGCLP35914 RNU6-941P-201ENST00000516346 108 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 RNU6-964P-201ENST00000516524 69 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 RNA5SP373-201ENST00000517271 95 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGCLP35914 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGCLP35914 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGCLP35914 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGCLP35914 AC007225.2-201ENST00000562529 256 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 RPL10P14-201ENST00000565265 298 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 IMMP1LP3-201ENST00000604197 224 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 MIR6862-1-201ENST00000613016 70 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 MIR6862-2-201ENST00000614755 70 ntBASIC5.32□□□□□ -1.56
HMGCLP35914 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HMGCLP35914 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGCLP35914 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCLP35914 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGCLP35914 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms