Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA1P35221 SNORA70.17-201ENST00000516449 133 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 HMGB1P42-201ENST00000532126 553 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.79□□□□□ -1.48
CTNNA1P35221 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.79□□□□□ -1.48
CTNNA1P35221 SULT1C2P2-201ENST00000562517 294 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.79□□□□□ -1.48
CTNNA1P35221 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.79□□□□□ -1.48
CTNNA1P35221 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.79□□□□□ -1.48
CTNNA1P35221 AC015802.2-201ENST00000589690 189 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 BMS1P7-201ENST00000602440 1052 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 HMGB1P51-201ENST00000605166 638 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.79□□□□□ -1.48
CTNNA1P35221 uc_338.7-201ENST00000621834 124 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 AC002044.3-201ENST00000623314 541 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CTNNA1P35221 AC092159.4-201ENST00000624944 550 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA1P35221 AC019072.1-201ENST00000604535 1551 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA1P35221 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA1P35221 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CTNNA1P35221 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CTNNA1P35221 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CTNNA1P35221 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTNNA1P35221 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTNNA1P35221 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CTNNA1P35221 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.78□□□□□ -1.48
CTNNA1P35221 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
CTNNA1P35221 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTNNA1P35221 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CTNNA1P35221 RNA5SP131-201ENST00000365452 119 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTNNA1P35221 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.78□□□□□ -1.48
CTNNA1P35221 RNA5SP241-201ENST00000391326 114 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 AC004386.1-201ENST00000393214 761 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CTNNA1P35221 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.78□□□□□ -1.48
CTNNA1P35221 RPSAP39-201ENST00000467439 883 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.78□□□□□ -1.48
CTNNA1P35221 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.78□□□□□ -1.48
CTNNA1P35221 OR52A4P-203ENST00000498233 1014 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.78□□□□□ -1.48
CTNNA1P35221 HAUS1P1-201ENST00000505275 832 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.78□□□□□ -1.48
CTNNA1P35221 SNORA70.20-201ENST00000516848 126 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 AC060775.1-201ENST00000518241 520 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 IGHV3-63-201ENST00000518422 341 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.78□□□□□ -1.48
CTNNA1P35221 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CTNNA1P35221 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CTNNA1P35221 AC084759.1-201ENST00000561168 290 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 AC009268.1-201ENST00000561352 1203 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.78□□□□□ -1.48
CTNNA1P35221 RN7SL290P-201ENST00000578661 300 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 AC108738.1-201ENST00000603703 237 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 AC034236.3-201ENST00000605999 461 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.78□□□□□ -1.48
CTNNA1P35221 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.78□□□□□ -1.48
CTNNA1P35221 AP003499.2-201ENST00000624100 483 ntBASIC5.78□□□□□ -1.48
CTNNA1P35221 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.78□□□□□ -1.48
CTNNA1P35221 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTNNA1P35221 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTNNA1P35221 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.78□□□□□ -1.48
CTNNA1P35221 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CTNNA1P35221 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CTNNA1P35221 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTNNA1P35221 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.77□□□□□ -1.48
CTNNA1P35221 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.77□□□□□ -1.48
CTNNA1P35221 AC073136.1-201ENST00000449426 2884 ntBASIC5.77□□□□□ -1.49
CTNNA1P35221 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.77□□□□□ -1.49
CTNNA1P35221 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CTNNA1P35221 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CTNNA1P35221 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.77□□□□□ -1.49
CTNNA1P35221 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.77□□□□□ -1.49
CTNNA1P35221 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CTNNA1P35221 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.77□□□□□ -1.49
CTNNA1P35221 AC069154.1-201ENST00000432914 542 ntBASIC5.77□□□□□ -1.49
CTNNA1P35221 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.77□□□□□ -1.49
CTNNA1P35221 XKRYP6-201ENST00000440468 1116 ntBASIC5.77□□□□□ -1.49
CTNNA1P35221 XKRYP3-201ENST00000442113 1116 ntBASIC5.77□□□□□ -1.49
CTNNA1P35221 TCEA1P3-201ENST00000443005 880 ntBASIC5.77□□□□□ -1.49
CTNNA1P35221 TXNP2-201ENST00000443918 295 ntBASIC5.77□□□□□ -1.49
CTNNA1P35221 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.77□□□□□ -1.49
CTNNA1P35221 OR52E3P-201ENST00000452083 936 ntBASIC5.77□□□□□ -1.49
CTNNA1P35221 CALM1P2-201ENST00000452941 448 ntBASIC5.77□□□□□ -1.49
CTNNA1P35221 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.77□□□□□ -1.49
CTNNA1P35221 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CTNNA1P35221 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CTNNA1P35221 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.77□□□□□ -1.49
CTNNA1P35221 BTG4P1-201ENST00000510421 183 ntBASIC5.77□□□□□ -1.49
CTNNA1P35221 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.77□□□□□ -1.49
CTNNA1P35221 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.77□□□□□ -1.49
CTNNA1P35221 OR7E10P-201ENST00000526420 991 ntBASIC5.77□□□□□ -1.49
CTNNA1P35221 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.77□□□□□ -1.49
CTNNA1P35221 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.77□□□□□ -1.49
CTNNA1P35221 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.77□□□□□ -1.49
CTNNA1P35221 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.77□□□□□ -1.49
CTNNA1P35221 AC010487.1-201ENST00000594408 1172 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms