Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC13P31276 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC13P31276 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC13P31276 CASC19-248ENST00000641674 1356 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC13P31276 RNU4-23P-201ENST00000362839 140 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HOXC13P31276 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HOXC13P31276 AL645927.1-201ENST00000396783 406 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC13P31276 TRIM60P17-201ENST00000415181 719 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC13P31276 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC13P31276 AC097523.2-201ENST00000435551 652 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 AC009963.4-201ENST00000448535 339 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 RPS26P41-201ENST00000450370 284 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 AURKAPS1-201ENST00000451805 1212 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC13P31276 MEMO1P4-201ENST00000453590 386 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC13P31276 AP000547.1-201ENST00000454360 617 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC13P31276 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
HOXC13P31276 AC004453.1-201ENST00000487895 408 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 OR52A4P-203ENST00000498233 1014 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC13P31276 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC13P31276 OR8X1P-201ENST00000534542 869 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC13P31276 AGGF1P7-201ENST00000562369 913 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 AP001357.1-201ENST00000586304 1053 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 AC093388.1-201ENST00000609166 430 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC13P31276 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC13P31276 AP001153.1-201ENST00000641024 338 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 AL137141.1-201ENST00000624622 4836 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HOXC13P31276 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC13P31276 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
HOXC13P31276 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
HOXC13P31276 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC13P31276 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC13P31276 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC13P31276 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXC13P31276 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXC13P31276 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC13P31276 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HOXC13P31276 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
HOXC13P31276 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HOXC13P31276 AC110792.3-201ENST00000595906 1614 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HOXC13P31276 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC13P31276 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC13P31276 RNU6-386P-201ENST00000362650 107 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 RNA5SP131-201ENST00000365452 119 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC13P31276 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HOXC13P31276 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXC13P31276 RNF10P1-201ENST00000418589 369 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXC13P31276 RPL7L1P9-201ENST00000431298 745 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXC13P31276 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.85□□□□□ -1.47
HOXC13P31276 AC019185.1-201ENST00000442718 389 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 RNU6-775P-201ENST00000459318 96 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 AC100832.1-201ENST00000471945 383 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 RN7SL30P-201ENST00000488416 306 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 AC072052.1-201ENST00000496556 306 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 RNU6-551P-201ENST00000516661 103 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXC13P31276 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXC13P31276 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC13P31276 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC13P31276 DHFRP1-201ENST00000579682 559 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 MIR4420-201ENST00000583944 77 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXC13P31276 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
HOXC13P31276 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC13P31276 AC019131.2-201ENST00000609071 870 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.85□□□□□ -1.47
HOXC13P31276 AC008833.1-201ENST00000611633 691 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC13P31276 AC037198.3-201ENST00000616754 526 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC13P31276 SAMMSON-227ENST00000642114 1199 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HOXC13P31276 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC13P31276 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC13P31276 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXC13P31276 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC13P31276 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC13P31276 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HOXC13P31276 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HOXC13P31276 UGT2B26P-201ENST00000508672 1613 ntBASIC5.85□□□□□ -1.47
HOXC13P31276 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC13P31276 AC083899.1-201ENST00000454465 3819 ntBASIC5.84□□□□□ -1.47
HOXC13P31276 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC13P31276 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
HOXC13P31276 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms