Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ABCD3P28288 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
ABCD3P28288 AC004656.1-201ENST00000568479 4951 ntBASIC5.44□□□□□ -1.54
ABCD3P28288 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ABCD3P28288 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
ABCD3P28288 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
ABCD3P28288 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
ABCD3P28288 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
ABCD3P28288 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ABCD3P28288 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ABCD3P28288 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ABCD3P28288 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ABCD3P28288 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
ABCD3P28288 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ABCD3P28288 PDZK1P1-202ENST00000425209 1350 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ABCD3P28288 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ABCD3P28288 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.43□□□□□ -1.54
ABCD3P28288 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
ABCD3P28288 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ABCD3P28288 AL591135.1-201ENST00000401578 5914 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
ABCD3P28288 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ABCD3P28288 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ABCD3P28288 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ABCD3P28288 MIR1203-201ENST00000408812 85 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 MIR1282-201ENST00000408865 101 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ABCD3P28288 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.43□□□□□ -1.54
ABCD3P28288 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.43□□□□□ -1.54
ABCD3P28288 KCTD9P1-201ENST00000430462 1167 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.43□□□□□ -1.54
ABCD3P28288 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.43□□□□□ -1.54
ABCD3P28288 PCBP2P1-201ENST00000437262 977 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 RPS12P17-201ENST00000438591 377 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 RPS10P18-201ENST00000442662 495 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 AC097499.1-201ENST00000444277 208 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.43□□□□□ -1.54
ABCD3P28288 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.43□□□□□ -1.54
ABCD3P28288 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.43□□□□□ -1.54
ABCD3P28288 RPL38P3-201ENST00000484463 213 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 RN7SL57P-201ENST00000493687 290 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
ABCD3P28288 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.43□□□□□ -1.54
ABCD3P28288 AC006499.4-201ENST00000510947 694 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 RPS27AP18-201ENST00000515536 459 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 RNA5SP271-201ENST00000516700 88 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.43□□□□□ -1.54
ABCD3P28288 AC019227.1-201ENST00000526902 510 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 AP000648.1-201ENST00000529682 397 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.43□□□□□ -1.54
ABCD3P28288 NANOGNBP2-201ENST00000544753 553 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.43□□□□□ -1.54
ABCD3P28288 AC090888.3-201ENST00000558917 509 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.43□□□□□ -1.54
ABCD3P28288 AC007346.2-201ENST00000564816 892 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 AC106734.1-201ENST00000568646 663 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.43□□□□□ -1.54
ABCD3P28288 EIF1P5-201ENST00000585002 234 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ABCD3P28288 AL031601.1-201ENST00000605702 394 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 AC026741.1-201ENST00000605892 482 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 AC011374.2-201ENST00000607135 526 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 AC010872.1-201ENST00000624225 675 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 SNX18P12-201ENST00000624821 759 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.43□□□□□ -1.54
ABCD3P28288 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ABCD3P28288 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
ABCD3P28288 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
ABCD3P28288 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ABCD3P28288 CCT8P1-201ENST00000413611 1657 ntBASIC5.43□□□□□ -1.54
ABCD3P28288 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.43□□□□□ -1.54
ABCD3P28288 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ABCD3P28288 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
ABCD3P28288 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.43□□□□□ -1.54
ABCD3P28288 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
ABCD3P28288 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ABCD3P28288 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ABCD3P28288 AC027228.2-201ENST00000567141 2154 ntBASIC5.42□□□□□ -1.54
ABCD3P28288 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
ABCD3P28288 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ABCD3P28288 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ABCD3P28288 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ABCD3P28288 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.42□□□□□ -1.54
ABCD3P28288 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
ABCD3P28288 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ABCD3P28288 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ABCD3P28288 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ABCD3P28288 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ABCD3P28288 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ABCD3P28288 RNU1-150P-201ENST00000362491 162 ntBASIC5.42□□□□□ -1.54
ABCD3P28288 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.42□□□□□ -1.54
ABCD3P28288 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ABCD3P28288 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ABCD3P28288 RNU6-1176P-201ENST00000390955 107 ntBASIC5.42□□□□□ -1.54
ABCD3P28288 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
ABCD3P28288 HMGN1P20-201ENST00000411849 300 ntBASIC5.42□□□□□ -1.54
ABCD3P28288 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms