Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
NFKB1P19838 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NFKB1P19838 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.14□□□□□ -1.27
NFKB1P19838 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NFKB1P19838 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NFKB1P19838 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
NFKB1P19838 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NFKB1P19838 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
NFKB1P19838 TMEM75-201ENST00000624314 2165 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.13□□□□□ -1.27
NFKB1P19838 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.13□□□□□ -1.27
NFKB1P19838 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.13□□□□□ -1.27
NFKB1P19838 AL669831.5-218ENST00000591702 1873 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NFKB1P19838 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.13□□□□□ -1.27
NFKB1P19838 AC006210.2-201ENST00000367074 1545 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
NFKB1P19838 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.13□□□□□ -1.27
NFKB1P19838 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.13□□□□□ -1.27
NFKB1P19838 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NFKB1P19838 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NFKB1P19838 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
NFKB1P19838 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
NFKB1P19838 RNY4P14-201ENST00000363656 96 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 RNU6-501P-201ENST00000364072 100 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
NFKB1P19838 MIR301B-201ENST00000390813 78 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 EEF1GP6-201ENST00000402309 905 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 RPS20P15-201ENST00000412792 311 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC7.13□□□□□ -1.27
NFKB1P19838 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC7.13□□□□□ -1.27
NFKB1P19838 AC009237.2-201ENST00000421358 284 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 VN1R20P-201ENST00000425215 966 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
NFKB1P19838 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC7.13□□□□□ -1.27
NFKB1P19838 AC019185.3-201ENST00000438805 323 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 AL450263.2-201ENST00000439400 589 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 AL353803.3-201ENST00000444641 335 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NFKB1P19838 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.13□□□□□ -1.27
NFKB1P19838 RPL34P34-201ENST00000465389 354 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 RPL30P9-201ENST00000465586 330 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 TUBBP11-201ENST00000472255 252 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.13□□□□□ -1.27
NFKB1P19838 AC117522.3-201ENST00000507974 584 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NFKB1P19838 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
NFKB1P19838 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.13□□□□□ -1.27
NFKB1P19838 AP001803.1-201ENST00000525668 147 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 OR5M6P-201ENST00000530227 937 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 OR4C1P-201ENST00000530880 937 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
NFKB1P19838 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.13□□□□□ -1.27
NFKB1P19838 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.13□□□□□ -1.27
NFKB1P19838 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NFKB1P19838 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC7.13□□□□□ -1.27
NFKB1P19838 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.13□□□□□ -1.27
NFKB1P19838 MIR4786-201ENST00000583954 80 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 AC005498.1-201ENST00000592125 465 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 DUXAP4-201ENST00000603046 613 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 AC092032.1-201ENST00000603090 165 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 AC122710.3-201ENST00000606566 541 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 AC008536.2-201ENST00000607284 349 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 AC024560.3-201ENST00000608482 349 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 AL161931.1-201ENST00000612768 246 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC7.13□□□□□ -1.27
NFKB1P19838 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.13□□□□□ -1.27
NFKB1P19838 RN7SL126P-201ENST00000616400 299 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 AL158209.2-201ENST00000619266 216 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 MIR6829-201ENST00000620375 67 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.13□□□□□ -1.27
NFKB1P19838 AC024614.3-201ENST00000637860 256 ntBASIC7.13□□□□□ -1.27
NFKB1P19838 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.13□□□□□ -1.27
NFKB1P19838 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NFKB1P19838 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NFKB1P19838 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NFKB1P19838 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
NFKB1P19838 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.13□□□□□ -1.27
NFKB1P19838 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.12□□□□□ -1.27
NFKB1P19838 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
NFKB1P19838 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
NFKB1P19838 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 AP002800.1-201ENST00000624982 2225 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 AC135352.1-201ENST00000506173 1418 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
NFKB1P19838 AC092725.2-201ENST00000567658 1389 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
NFKB1P19838 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.12□□□□□ -1.27
NFKB1P19838 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
NFKB1P19838 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.12□□□□□ -1.27
NFKB1P19838 AL080312.1-201ENST00000256654 824 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 ENSAP3-201ENST00000312710 333 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 AC023886.2-201ENST00000321285 411 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms