Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL355433.1-201ENST00000422804 300 ntBASIC5.37□□□□□ -1.55
XRCC1P18887 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.37□□□□□ -1.55
XRCC1P18887 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.37□□□□□ -1.55
XRCC1P18887 NFYAP1-201ENST00000431953 972 ntBASIC5.37□□□□□ -1.55
XRCC1P18887 NPM1P48-201ENST00000436002 853 ntBASIC5.37□□□□□ -1.55
XRCC1P18887 AC105399.1-202ENST00000447303 205 ntBASIC5.37□□□□□ -1.55
XRCC1P18887 AL606490.1-201ENST00000452266 765 ntBASIC5.37□□□□□ -1.55
XRCC1P18887 AC026348.1-201ENST00000462549 1053 ntBASIC5.37□□□□□ -1.55
XRCC1P18887 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.37□□□□□ -1.55
XRCC1P18887 RPL7P39-201ENST00000481157 744 ntBASIC5.37□□□□□ -1.55
XRCC1P18887 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.37□□□□□ -1.55
XRCC1P18887 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.37□□□□□ -1.55
XRCC1P18887 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.37□□□□□ -1.55
XRCC1P18887 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
XRCC1P18887 LSM3P2-201ENST00000551246 273 ntBASIC5.37□□□□□ -1.55
XRCC1P18887 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.37□□□□□ -1.55
XRCC1P18887 AC000068.2-201ENST00000608816 460 ntBASIC5.37□□□□□ -1.55
XRCC1P18887 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.37□□□□□ -1.55
XRCC1P18887 AC087821.1-201ENST00000623639 567 ntBASIC5.37□□□□□ -1.55
XRCC1P18887 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.37□□□□□ -1.55
XRCC1P18887 AC138627.1-204ENST00000641894 765 ntBASIC5.37□□□□□ -1.55
XRCC1P18887 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
XRCC1P18887 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
XRCC1P18887 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.37□□□□□ -1.55
XRCC1P18887 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
XRCC1P18887 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
XRCC1P18887 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
XRCC1P18887 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.37□□□□□ -1.55
XRCC1P18887 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.36□□□□□ -1.55
XRCC1P18887 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
XRCC1P18887 AC011755.1-201ENST00000623763 2049 ntBASIC5.36□□□□□ -1.55
XRCC1P18887 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
XRCC1P18887 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
XRCC1P18887 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
XRCC1P18887 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
XRCC1P18887 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
XRCC1P18887 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
XRCC1P18887 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
XRCC1P18887 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
XRCC1P18887 RNA5SP183-201ENST00000362452 119 ntBASIC5.36□□□□□ -1.55
XRCC1P18887 MIR1178-201ENST00000408396 91 ntBASIC5.36□□□□□ -1.55
XRCC1P18887 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.36□□□□□ -1.55
XRCC1P18887 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.36□□□□□ -1.55
XRCC1P18887 RIMKLBP2-201ENST00000424737 654 ntBASIC5.36□□□□□ -1.55
XRCC1P18887 OR52E3P-201ENST00000452083 936 ntBASIC5.36□□□□□ -1.55
XRCC1P18887 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.36□□□□□ -1.55
XRCC1P18887 COPS8P2-201ENST00000473228 627 ntBASIC5.36□□□□□ -1.55
XRCC1P18887 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
XRCC1P18887 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.36□□□□□ -1.55
XRCC1P18887 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.36□□□□□ -1.55
XRCC1P18887 AC092709.1-201ENST00000521355 1045 ntBASIC5.36□□□□□ -1.55
XRCC1P18887 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.36□□□□□ -1.55
XRCC1P18887 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.36□□□□□ -1.55
XRCC1P18887 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.36□□□□□ -1.55
XRCC1P18887 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.36□□□□□ -1.55
XRCC1P18887 Z95327.3-201ENST00000610385 572 ntBASIC5.36□□□□□ -1.55
XRCC1P18887 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.36□□□□□ -1.55
XRCC1P18887 AC004808.2-201ENST00000627965 773 ntBASIC5.36□□□□□ -1.55
XRCC1P18887 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
XRCC1P18887 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
XRCC1P18887 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.36□□□□□ -1.55
XRCC1P18887 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
XRCC1P18887 ICE2P1-201ENST00000512800 1849 ntBASIC5.36□□□□□ -1.55
XRCC1P18887 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
XRCC1P18887 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
XRCC1P18887 GVINP1-202ENST00000531871 7271 ntBASIC5.36□□□□□ -1.55
XRCC1P18887 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.36□□□□□ -1.55
XRCC1P18887 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.36□□□□□ -1.55
XRCC1P18887 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
XRCC1P18887 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
XRCC1P18887 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
XRCC1P18887 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
XRCC1P18887 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
XRCC1P18887 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
XRCC1P18887 AL078621.3-201ENST00000623707 2042 ntBASIC5.35□□□□□ -1.55
XRCC1P18887 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.35□□□□□ -1.55
XRCC1P18887 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.35□□□□□ -1.55
XRCC1P18887 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.35□□□□□ -1.55
XRCC1P18887 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.35□□□□□ -1.55
XRCC1P18887 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
XRCC1P18887 SYT14P1-202ENST00000600441 1448 ntBASIC5.35□□□□□ -1.55
XRCC1P18887 CR383656.5-201ENST00000547616 1340 ntBASIC5.35□□□□□ -1.55
XRCC1P18887 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
XRCC1P18887 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
XRCC1P18887 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
XRCC1P18887 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.35□□□□□ -1.55
XRCC1P18887 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.35□□□□□ -1.55
XRCC1P18887 SLC35E1P1-201ENST00000419313 864 ntBASIC5.35□□□□□ -1.55
XRCC1P18887 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
XRCC1P18887 RPL7L1P9-201ENST00000431298 745 ntBASIC5.35□□□□□ -1.55
XRCC1P18887 TCEA1P3-201ENST00000443005 880 ntBASIC5.35□□□□□ -1.55
XRCC1P18887 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.35□□□□□ -1.55
XRCC1P18887 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.35□□□□□ -1.55
XRCC1P18887 AC024558.1-201ENST00000505008 528 ntBASIC5.35□□□□□ -1.55
XRCC1P18887 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.35□□□□□ -1.55
XRCC1P18887 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.35□□□□□ -1.55
XRCC1P18887 OR5AM1P-201ENST00000532136 1032 ntBASIC5.35□□□□□ -1.55
XRCC1P18887 BLZF2P-201ENST00000553776 1130 ntBASIC5.35□□□□□ -1.55
XRCC1P18887 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.35□□□□□ -1.55
XRCC1P18887 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms