Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 U1.34-201ENST00000618578 162 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 U1.31-201ENST00000620022 160 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 AC005514.1-201ENST00000623521 208 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 AC091965.5-201ENST00000624785 342 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.31□□□□□ -1.4
COL6A2P12110 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL6A2P12110 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL6A2P12110 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL6A2P12110 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL6A2P12110 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL6A2P12110 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL6A2P12110 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL6A2P12110 AC010132.4-201ENST00000569883 1368 ntBASIC6.31□□□□□ -1.4
COL6A2P12110 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL6A2P12110 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
COL6A2P12110 AL353743.3-201ENST00000442109 1468 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL6A2P12110 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.3□□□□□ -1.4
COL6A2P12110 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL6A2P12110 SNORD16-201ENST00000362803 99 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL6A2P12110 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL6A2P12110 RNU6-157P-201ENST00000383957 107 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 U3.52-201ENST00000384034 216 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 RNU4-31P-201ENST00000384211 141 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 ATP5F1P3-201ENST00000397213 657 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 OOSP1-201ENST00000398992 1270 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 AL121978.1-201ENST00000402778 359 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.3□□□□□ -1.4
COL6A2P12110 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL6A2P12110 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.3□□□□□ -1.4
COL6A2P12110 YWHAZP7-201ENST00000436906 631 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.3□□□□□ -1.4
COL6A2P12110 NPM1P33-201ENST00000438918 872 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.3□□□□□ -1.4
COL6A2P12110 AC015983.1-201ENST00000441577 373 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.3□□□□□ -1.4
COL6A2P12110 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.3□□□□□ -1.4
COL6A2P12110 RPS27AP3-201ENST00000453803 454 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 AL355032.1-201ENST00000472981 438 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 H3F3AP5-201ENST00000475267 429 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.3□□□□□ -1.4
COL6A2P12110 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.3□□□□□ -1.4
COL6A2P12110 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC6.3□□□□□ -1.4
COL6A2P12110 MTCO2P32-201ENST00000514865 403 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.3□□□□□ -1.4
COL6A2P12110 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.3□□□□□ -1.4
COL6A2P12110 AC010198.2-201ENST00000550612 259 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC6.3□□□□□ -1.4
COL6A2P12110 AC092718.4-201ENST00000566639 716 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 MIR3189-201ENST00000578735 73 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC6.3□□□□□ -1.4
COL6A2P12110 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.3□□□□□ -1.4
COL6A2P12110 AC004805.3-201ENST00000603178 310 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 DUXAP11-201ENST00000603858 526 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 AC106791.2-201ENST00000604680 391 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 AC019131.2-201ENST00000609071 870 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 AC009163.6-201ENST00000612367 342 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.3□□□□□ -1.4
COL6A2P12110 AC139769.3-201ENST00000618383 175 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC6.3□□□□□ -1.4
COL6A2P12110 AC025262.3-201ENST00000623666 360 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL6A2P12110 AC027559.1-201ENST00000636288 271 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL6A2P12110 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL6A2P12110 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL6A2P12110 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL6A2P12110 AC093536.2-201ENST00000565257 1406 ntBASIC6.3□□□□□ -1.4
COL6A2P12110 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL6A2P12110 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.3□□□□□ -1.4
COL6A2P12110 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.3□□□□□ -1.4
COL6A2P12110 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
COL6A2P12110 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL6A2P12110 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL6A2P12110 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL6A2P12110 AL442128.2-201ENST00000620246 1824 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 DDX18P6-201ENST00000450119 1997 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 GUCY1B2-204ENST00000531898 1979 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL6A2P12110 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL6A2P12110 AC073055.1-201ENST00000456901 1621 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL6A2P12110 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
COL6A2P12110 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.29□□□□□ -1.4
COL6A2P12110 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL6A2P12110 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.29□□□□□ -1.4
COL6A2P12110 RNU6-353P-201ENST00000364266 108 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL6A2P12110 RNA5SP105-201ENST00000391123 113 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 YWHAZP4-201ENST00000392459 708 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 RPL23AP17-201ENST00000401064 499 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AL121977.1-201ENST00000401636 979 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AL121835.1-201ENST00000404250 354 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL6A2P12110 AC019178.2-201ENST00000423595 505 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AC093084.1-201ENST00000424233 687 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AL157884.1-201ENST00000424561 454 ntBASIC6.29□□□□□ -1.4
COL6A2P12110 AL593851.1-201ENST00000426171 157 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 213.2 ms