Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNA5SP90-201ENST00000364801 99 ntBASIC5.15□□□□□ -1.59
TNFP01375 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFP01375 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TNFP01375 MIR937-201ENST00000401271 86 ntBASIC5.15□□□□□ -1.59
TNFP01375 AL133270.1-201ENST00000402635 279 ntBASIC5.15□□□□□ -1.59
TNFP01375 NUDT19P3-201ENST00000404698 555 ntBASIC5.15□□□□□ -1.59
TNFP01375 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFP01375 RPS4XP16-201ENST00000427198 791 ntBASIC5.15□□□□□ -1.59
TNFP01375 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFP01375 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TNFP01375 REG1CP-206ENST00000447469 496 ntBASIC5.15□□□□□ -1.59
TNFP01375 AC092647.2-201ENST00000452998 253 ntBASIC5.15□□□□□ -1.59
TNFP01375 AC097484.1-201ENST00000471148 389 ntBASIC5.15□□□□□ -1.59
TNFP01375 BX284632.1-201ENST00000478218 541 ntBASIC5.15□□□□□ -1.59
TNFP01375 AC093815.1-201ENST00000508637 280 ntBASIC5.15□□□□□ -1.59
TNFP01375 AC004980.4-201ENST00000513375 203 ntBASIC5.15□□□□□ -1.59
TNFP01375 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFP01375 HMGN1P9-201ENST00000515212 298 ntBASIC5.15□□□□□ -1.59
TNFP01375 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.15□□□□□ -1.59
TNFP01375 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFP01375 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFP01375 AL157762.1-201ENST00000619612 415 ntBASIC5.15□□□□□ -1.59
TNFP01375 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFP01375 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TNFP01375 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TNFP01375 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TNFP01375 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TNFP01375 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TNFP01375 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.15□□□□□ -1.59
TNFP01375 AC003973.3-201ENST00000624863 2822 ntBASIC5.15□□□□□ -1.59
TNFP01375 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFP01375 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFP01375 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFP01375 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.14□□□□□ -1.59
TNFP01375 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
TNFP01375 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFP01375 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFP01375 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TNFP01375 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFP01375 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFP01375 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TNFP01375 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TNFP01375 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFP01375 RN7SKP153-201ENST00000365026 316 ntBASIC5.14□□□□□ -1.59
TNFP01375 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TNFP01375 MIR550A3-201ENST00000390735 95 ntBASIC5.14□□□□□ -1.59
TNFP01375 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TNFP01375 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFP01375 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TNFP01375 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TNFP01375 AL590762.4-201ENST00000425885 253 ntBASIC5.14□□□□□ -1.59
TNFP01375 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFP01375 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFP01375 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFP01375 AC009963.4-201ENST00000448535 339 ntBASIC5.14□□□□□ -1.59
TNFP01375 RPL7P61-201ENST00000451721 751 ntBASIC5.14□□□□□ -1.59
TNFP01375 RPS23P1-201ENST00000491662 432 ntBASIC5.14□□□□□ -1.59
TNFP01375 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.14□□□□□ -1.59
TNFP01375 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.14□□□□□ -1.59
TNFP01375 OR4A43P-201ENST00000532938 908 ntBASIC5.14□□□□□ -1.59
TNFP01375 AP002373.2-201ENST00000541631 1060 ntBASIC5.14□□□□□ -1.59
TNFP01375 AC233699.1-201ENST00000569955 1168 ntBASIC5.14□□□□□ -1.59
TNFP01375 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFP01375 AL162431.4-201ENST00000604674 411 ntBASIC5.14□□□□□ -1.59
TNFP01375 AC093388.1-201ENST00000609166 430 ntBASIC5.14□□□□□ -1.59
TNFP01375 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFP01375 BX284613.1-201ENST00000452221 1641 ntBASIC5.14□□□□□ -1.59
TNFP01375 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFP01375 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFP01375 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TNFP01375 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TNFP01375 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.14□□□□□ -1.59
TNFP01375 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFP01375 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFP01375 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TNFP01375 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFP01375 AL355488.2-201ENST00000609909 2850 ntBASIC5.14□□□□□ -1.59
TNFP01375 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
TNFP01375 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.13□□□□□ -1.59
TNFP01375 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.13□□□□□ -1.59
TNFP01375 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TNFP01375 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TNFP01375 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TNFP01375 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TNFP01375 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.13□□□□□ -1.59
TNFP01375 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.13□□□□□ -1.59
TNFP01375 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TNFP01375 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.13□□□□□ -1.59
TNFP01375 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TNFP01375 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TNFP01375 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TNFP01375 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TNFP01375 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TNFP01375 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TNFP01375 MIR1182-201ENST00000408363 97 ntBASIC5.13□□□□□ -1.59
TNFP01375 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.13□□□□□ -1.59
TNFP01375 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.13□□□□□ -1.59
TNFP01375 AC017019.1-201ENST00000426129 261 ntBASIC5.13□□□□□ -1.59
TNFP01375 AC138761.5-201ENST00000433967 325 ntBASIC5.13□□□□□ -1.59
TNFP01375 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 1497.1 ms