Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
UPK1AO00322 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.98□□□□□ -1.61
UPK1AO00322 RPL7P45-201ENST00000455851 743 ntBASIC4.98□□□□□ -1.61
UPK1AO00322 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.98□□□□□ -1.61
UPK1AO00322 RN7SL423P-201ENST00000486202 304 ntBASIC4.98□□□□□ -1.61
UPK1AO00322 RPL7P51-201ENST00000490532 749 ntBASIC4.98□□□□□ -1.61
UPK1AO00322 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.98□□□□□ -1.61
UPK1AO00322 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.98□□□□□ -1.61
UPK1AO00322 AC022360.1-201ENST00000521058 340 ntBASIC4.98□□□□□ -1.61
UPK1AO00322 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.98□□□□□ -1.61
UPK1AO00322 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.98□□□□□ -1.61
UPK1AO00322 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.98□□□□□ -1.61
UPK1AO00322 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UPK1AO00322 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UPK1AO00322 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.98□□□□□ -1.61
UPK1AO00322 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.98□□□□□ -1.61
UPK1AO00322 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.98□□□□□ -1.61
UPK1AO00322 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.98□□□□□ -1.61
UPK1AO00322 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
UPK1AO00322 AL353684.1-201ENST00000622677 1120 ntBASIC4.98□□□□□ -1.61
UPK1AO00322 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
UPK1AO00322 GVINP1-202ENST00000531871 7271 ntBASIC4.98□□□□□ -1.61
UPK1AO00322 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UPK1AO00322 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
UPK1AO00322 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
UPK1AO00322 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.98□□□□□ -1.61
UPK1AO00322 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
UPK1AO00322 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
UPK1AO00322 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
UPK1AO00322 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UPK1AO00322 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
UPK1AO00322 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.97□□□□□ -1.61
UPK1AO00322 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UPK1AO00322 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.97□□□□□ -1.61
UPK1AO00322 TCP1P3-201ENST00000414406 1498 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.97□□□□□ -1.61
UPK1AO00322 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
UPK1AO00322 UBBP2-201ENST00000376781 231 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
UPK1AO00322 RNU1-77P-201ENST00000390868 162 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
UPK1AO00322 SEPT7P2-202ENST00000398921 823 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 HSPA8P15-201ENST00000401676 786 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 AL513325.1-201ENST00000417716 1034 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.97□□□□□ -1.61
UPK1AO00322 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.97□□□□□ -1.61
UPK1AO00322 MGAT2P2-201ENST00000427194 797 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.97□□□□□ -1.61
UPK1AO00322 AC090018.1-201ENST00000434369 367 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.97□□□□□ -1.61
UPK1AO00322 CYCSP12-201ENST00000437729 300 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.97□□□□□ -1.61
UPK1AO00322 RPL12P11-201ENST00000439970 501 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 AL136455.1-201ENST00000441083 1240 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.97□□□□□ -1.61
UPK1AO00322 RN7SL184P-201ENST00000488308 297 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 AC022133.1-201ENST00000490961 571 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.97□□□□□ -1.61
UPK1AO00322 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.97□□□□□ -1.61
UPK1AO00322 FTH1P11-201ENST00000517577 551 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.97□□□□□ -1.61
UPK1AO00322 HMGB1P40-201ENST00000525121 540 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.97□□□□□ -1.61
UPK1AO00322 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.97□□□□□ -1.61
UPK1AO00322 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.97□□□□□ -1.61
UPK1AO00322 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.97□□□□□ -1.61
UPK1AO00322 AC005252.1-201ENST00000604518 1063 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UPK1AO00322 AL359513.1-201ENST00000614364 557 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 AC007204.2-201ENST00000615022 616 ntBASIC4.97□□□□□ -1.61
UPK1AO00322 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
UPK1AO00322 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UPK1AO00322 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UPK1AO00322 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.97□□□□□ -1.61
UPK1AO00322 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
UPK1AO00322 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.97□□□□□ -1.61
UPK1AO00322 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
UPK1AO00322 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
UPK1AO00322 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
UPK1AO00322 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
UPK1AO00322 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
UPK1AO00322 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
UPK1AO00322 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
UPK1AO00322 AC005522.1-201ENST00000395416 346 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 AL390774.1-201ENST00000411924 246 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 MARK2P12-201ENST00000420129 585 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 RPL34P6-201ENST00000432390 345 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.96□□□□□ -1.62
UPK1AO00322 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.96□□□□□ -1.62
UPK1AO00322 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.96□□□□□ -1.62
UPK1AO00322 GTF3AP5-201ENST00000442645 697 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 RPL7AP61-201ENST00000443410 636 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 CYCSP24-201ENST00000445119 316 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 AC104634.1-201ENST00000452720 462 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 AC079168.1-201ENST00000458741 345 ntBASIC4.96□□□□□ -1.62
UPK1AO00322 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.96□□□□□ -1.62
UPK1AO00322 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.96□□□□□ -1.62
UPK1AO00322 RPL7P41-201ENST00000485823 957 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms