Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM1O00151 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
PDLIM1O00151 RN7SKP15-201ENST00000364742 309 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM1O00151 AC016739.1-201ENST00000405359 345 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM1O00151 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM1O00151 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM1O00151 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM1O00151 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM1O00151 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM1O00151 THAP12P8-201ENST00000447914 2115 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 AC144530.1-201ENST00000452862 555 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM1O00151 RN7SL273P-201ENST00000481561 299 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 AC091917.2-201ENST00000505002 744 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM1O00151 AP000648.1-201ENST00000529682 397 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM1O00151 AC084033.1-201ENST00000550830 633 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.25□□□□□ -1.57
PDLIM1O00151 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
PDLIM1O00151 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PDLIM1O00151 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM1O00151 RN7SL176P-201ENST00000580352 264 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.25□□□□□ -1.57
PDLIM1O00151 AC010615.3-201ENST00000597319 394 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM1O00151 AL031601.1-201ENST00000605702 394 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 LINC00901.1-201ENST00000617252 152 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 AP001005.3-201ENST00000622049 129 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 AC129915.3-201ENST00000634128 948 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM1O00151 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PDLIM1O00151 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM1O00151 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM1O00151 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM1O00151 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM1O00151 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM1O00151 AC027228.2-201ENST00000567141 2154 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 AC126323.6-202ENST00000568092 3511 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PDLIM1O00151 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM1O00151 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM1O00151 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM1O00151 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
PDLIM1O00151 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM1O00151 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PDLIM1O00151 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM1O00151 OR7E25P-201ENST00000344844 931 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM1O00151 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PDLIM1O00151 RNU2-22P-201ENST00000411266 212 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM1O00151 DEFA9P-201ENST00000433042 285 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 NDUFS5P5-201ENST00000437256 321 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 TUBB4BP6-201ENST00000437576 479 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM1O00151 RPS23P2-201ENST00000463671 415 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 AC094085.1-201ENST00000468914 584 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 AL122020.1-201ENST00000472287 459 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.24□□□□□ -1.57
PDLIM1O00151 AP001960.1-201ENST00000506494 658 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 AC113398.2-201ENST00000507630 558 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM1O00151 SNORD116-30-201ENST00000516468 85 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM1O00151 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM1O00151 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM1O00151 AC068305.2-201ENST00000550567 1205 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM1O00151 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM1O00151 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.24□□□□□ -1.57
PDLIM1O00151 MIR4776-2-201ENST00000580204 80 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM1O00151 AC009237.13-201ENST00000603193 276 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 SNORA35B-201ENST00000607417 129 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 AL139099.4-201ENST00000614802 114 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 AC079298.2-201ENST00000623885 459 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM1O00151 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM1O00151 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
PDLIM1O00151 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM1O00151 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM1O00151 AC104118.1-201ENST00000607625 1589 ntBASIC5.24□□□□□ -1.57
PDLIM1O00151 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.23□□□□□ -1.57
PDLIM1O00151 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PDLIM1O00151 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.23□□□□□ -1.57
PDLIM1O00151 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.23□□□□□ -1.57
PDLIM1O00151 OR52B1P-201ENST00000316506 909 ntBASIC5.23□□□□□ -1.57
PDLIM1O00151 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDLIM1O00151 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM1O00151 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms