Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 DCN-218ENST00000551354 2924 ntTSL 3 BASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 OR4F13P-202ENST00000560066 2054 ntBASIC3.79□□□□□ -1.8
LINC00588Q9Y4M8 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC235565.1-201ENST00000456962 1325 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 RNA5SP335-201ENST00000363817 110 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 RNU6-171P-201ENST00000384354 107 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 RN7SKP278-201ENST00000410504 342 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC007161.1-204ENST00000423039 460 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 OR10T1P-201ENST00000424327 947 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 ARAFP2-201ENST00000440565 559 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 SNRPFP2-201ENST00000440710 251 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 RN7SL30P-201ENST00000488416 306 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 RN7SL447P-201ENST00000494711 245 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 KATNBL1P4-201ENST00000503545 918 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 SCARNA16.4-201ENST00000516956 187 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC027308.1-201ENST00000517993 110 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 BLZF2P-201ENST00000553776 1130 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AL049779.2-201ENST00000553847 315 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC084759.1-201ENST00000561168 290 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AP005403.1-201ENST00000579720 229 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 OR7E18P-201ENST00000592589 702 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AL512329.2-201ENST00000607350 548 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 AC112255.1-201ENST00000624070 2493 ntBASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00588Q9Y4M8 MTND5P23-201ENST00000430812 1655 ntBASIC3.78□□□□□ -1.81
LINC00588Q9Y4M8 AC245100.2-201ENST00000454544 1679 ntBASIC3.78□□□□□ -1.81
LINC00588Q9Y4M8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC3.78□□□□□ -1.81
LINC00588Q9Y4M8 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LINC00588Q9Y4M8 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
LINC00588Q9Y4M8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
LINC00588Q9Y4M8 EEF1A1P33-201ENST00000554413 1362 ntBASIC3.77□□□□□ -1.81
LINC00588Q9Y4M8 AC093591.2-201ENST00000565254 3843 ntBASIC3.77□□□□□ -1.81
LINC00588Q9Y4M8 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LINC00588Q9Y4M8 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC3.77□□□□□ -1.81
LINC00588Q9Y4M8 UQCRC2P1-201ENST00000417777 1332 ntBASIC3.77□□□□□ -1.81
LINC00588Q9Y4M8 CR383656.5-201ENST00000547616 1340 ntBASIC3.77□□□□□ -1.81
LINC00588Q9Y4M8 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LINC00588Q9Y4M8 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LINC00588Q9Y4M8 SMG1P7-201ENST00000565246 2704 ntBASIC3.77□□□□□ -1.81
LINC00588Q9Y4M8 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LINC00588Q9Y4M8 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LINC00588Q9Y4M8 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms