Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 LINC01963-201ENST00000562038 3148 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 AL078621.3-201ENST00000623707 2042 ntBASIC4.79□□□□□ -1.64
RHBDD3Q9Y3P4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC107027.3-201ENST00000565095 3473 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC091305.2-201ENST00000624049 1576 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC023490.2-201ENST00000359859 470 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 U3.7-201ENST00000363668 216 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 RNA5SP131-201ENST00000365452 119 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 NPM1P22-201ENST00000427761 952 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC005297.1-201ENST00000444765 862 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 IGBP1P3-201ENST00000447449 1000 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AP000547.1-201ENST00000454360 617 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 MORF4L2P1-201ENST00000503761 858 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC021193.1-201ENST00000511607 420 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 SNORA43.3-201ENST00000517240 103 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 OR11H3P-201ENST00000554547 982 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC005726.4-201ENST00000582858 458 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AL365181.4-201ENST00000609800 547 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AL359742.1-201ENST00000622497 540 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC135068.5-201ENST00000624197 983 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC009950.2-201ENST00000636548 183 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 MIR193BHG-214ENST00000641765 509 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 BTBD10P1-201ENST00000549824 1352 ntBASIC4.78□□□□□ -1.64
RHBDD3Q9Y3P4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.65
RHBDD3Q9Y3P4 MAPK10-328ENST00000641553 4009 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 RPL5P19-201ENST00000404228 893 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 RPS3P2-201ENST00000421346 701 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AL662874.1-201ENST00000426065 230 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 HSPD1P12-201ENST00000429127 1069 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 LRRC37A14P-201ENST00000452297 462 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 RN7SL583P-201ENST00000475692 287 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC093890.1-201ENST00000502554 540 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 UGT2A3P7-201ENST00000510485 734 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC092709.1-201ENST00000521355 1045 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms