Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AL359643.1-201ENST00000404109 423 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AL133260.1-201ENST00000405720 405 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 RN7SKP146-201ENST00000410242 334 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 RNA5SP198-201ENST00000410376 127 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AC104843.2-201ENST00000427666 297 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 HMGB3P10-201ENST00000434734 572 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 RPL6P30-201ENST00000443382 862 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AL645937.3-201ENST00000453647 936 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AC107015.1-201ENST00000466902 747 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AC022795.1-201ENST00000473808 480 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 RPL32P33-201ENST00000487023 394 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 RPS12P31-201ENST00000491419 398 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AP004607.5-201ENST00000532034 217 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 PCNAP4-201ENST00000532690 730 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AC084121.1-201ENST00000533882 835 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 OR1E3-201ENST00000575608 948 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AP001542.1-201ENST00000591314 200 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 FAM27E4-201ENST00000605259 342 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AL365181.4-201ENST00000609800 547 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 PSG10P-201ENST00000501199 1500 ntBASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
KCNIP3Q9Y2W7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC003973.3-201ENST00000624863 2822 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AL159987.1-201ENST00000347911 293 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 MEAF6P1-201ENST00000416092 327 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 ARMC4P1-201ENST00000438905 707 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 GTF3AP5-201ENST00000442645 697 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AL450023.1-201ENST00000450868 751 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 CFL1P4-201ENST00000451536 498 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC093166.4-201ENST00000457867 318 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 RPL7AP10-201ENST00000481016 791 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 RN7SL273P-201ENST00000481561 299 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 SCARNA20.4-201ENST00000516969 131 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC100784.1-201ENST00000522790 310 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC006530.1-201ENST00000555980 571 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 RN7SL230P-201ENST00000580835 303 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 RN7SL66P-201ENST00000582099 264 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC015819.1-201ENST00000613588 663 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms