Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 PRUNEP1-201ENST00000425846 705 ntBASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 HMGB3P24-201ENST00000433260 622 ntBASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AC096775.1-201ENST00000437724 448 ntBASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AC099521.1-201ENST00000482557 334 ntBASIC4.81□□□□□ -1.64
DUX4Q9UBX2 DUTP1-201ENST00000493631 470 ntBASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AC105384.2-201ENST00000508433 640 ntBASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AC021193.1-201ENST00000511607 420 ntBASIC4.81□□□□□ -1.64
DUX4Q9UBX2 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AC022826.1-201ENST00000519383 805 ntBASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AP000648.1-201ENST00000529682 397 ntBASIC4.81□□□□□ -1.64
DUX4Q9UBX2 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AC008521.2-201ENST00000591021 259 ntBASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AL031601.1-201ENST00000605702 394 ntBASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 AC026124.2-201ENST00000621847 656 ntBASIC4.81□□□□□ -1.64
DUX4Q9UBX2 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 MRE11P1-201ENST00000464884 2127 ntBASIC4.81□□□□□ -1.64
DUX4Q9UBX2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
DUX4Q9UBX2 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 TRIM51GP-201ENST00000534741 1350 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 SNORA64.1-201ENST00000362600 132 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 RNA5SP91-201ENST00000390902 119 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 RNA5SP241-201ENST00000391326 114 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 HMGB1P20-201ENST00000402555 677 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 OR13Z1P-201ENST00000416141 834 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 SUMO2P3-201ENST00000438311 288 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 RN7SL273P-201ENST00000481561 299 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 SNORA70.20-201ENST00000516848 126 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 SCARNA6.1-201ENST00000516989 238 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 OR10D4P-201ENST00000525892 951 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 DPPA2P4-201ENST00000563717 878 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 AC096996.1-201ENST00000563813 325 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 RN7SL435P-201ENST00000584418 282 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 AC009950.2-201ENST00000636548 183 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 AC106872.5-201ENST00000508856 1416 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 AC092111.2-201ENST00000611627 1414 ntBASIC4.8□□□□□ -1.64
DUX4Q9UBX2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
DUX4Q9UBX2 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.79□□□□□ -1.64
DUX4Q9UBX2 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DUX4Q9UBX2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DUX4Q9UBX2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.79□□□□□ -1.64
DUX4Q9UBX2 AC104964.3-201ENST00000606115 2860 ntBASIC4.79□□□□□ -1.64
DUX4Q9UBX2 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.79□□□□□ -1.64
DUX4Q9UBX2 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
DUX4Q9UBX2 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.79□□□□□ -1.64
DUX4Q9UBX2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms