Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MIR6806-201ENST00000622141 64 ntBASIC6.42□□□□□ -1.38
UPF2Q9HAU5 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
UPF2Q9HAU5 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
UPF2Q9HAU5 YES1P1-201ENST00000418510 1628 ntBASIC6.42□□□□□ -1.38
UPF2Q9HAU5 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
UPF2Q9HAU5 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
UPF2Q9HAU5 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
UPF2Q9HAU5 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
UPF2Q9HAU5 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
UPF2Q9HAU5 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.42□□□□□ -1.38
UPF2Q9HAU5 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 HCFC2P1-201ENST00000392864 1592 ntBASIC6.41□□□□□ -1.38
UPF2Q9HAU5 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 RPS20P25-201ENST00000412447 352 ntBASIC6.41□□□□□ -1.38
UPF2Q9HAU5 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 NANOGP4-201ENST00000427230 913 ntBASIC6.41□□□□□ -1.38
UPF2Q9HAU5 YY1P1-201ENST00000427625 668 ntBASIC6.41□□□□□ -1.38
UPF2Q9HAU5 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 CLNS1AP1-201ENST00000435954 682 ntBASIC6.41□□□□□ -1.38
UPF2Q9HAU5 AL157385.1-201ENST00000446973 268 ntBASIC6.41□□□□□ -1.38
UPF2Q9HAU5 AP006222.1-205ENST00000450734 457 ntBASIC6.41□□□□□ -1.38
UPF2Q9HAU5 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 SNORA43.3-201ENST00000517240 103 ntBASIC6.41□□□□□ -1.38
UPF2Q9HAU5 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 Z95327.3-201ENST00000610385 572 ntBASIC6.41□□□□□ -1.38
UPF2Q9HAU5 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 AC129915.3-201ENST00000634128 948 ntBASIC6.41□□□□□ -1.38
UPF2Q9HAU5 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 SCARNA15-201ENST00000607520 4325 ntBASIC6.41□□□□□ -1.38
UPF2Q9HAU5 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
UPF2Q9HAU5 AC099654.3-201ENST00000447087 1546 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.4□□□□□ -1.38
UPF2Q9HAU5 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
UPF2Q9HAU5 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
UPF2Q9HAU5 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
UPF2Q9HAU5 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
UPF2Q9HAU5 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AC004386.1-201ENST00000393214 761 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AL078599.1-201ENST00000402075 293 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 Z93019.1-201ENST00000416450 973 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AC013429.2-201ENST00000418798 781 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 NAP1L4P2-201ENST00000425958 899 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 CLUHP1-201ENST00000435012 1190 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 GAPDHP25-201ENST00000447061 1001 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AL359839.1-201ENST00000451975 1160 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AC118758.1-202ENST00000454719 225 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AL035090.1-201ENST00000454835 332 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AC058823.1-201ENST00000485315 474 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AL117692.1-201ENST00000494283 713 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.4□□□□□ -1.38
UPF2Q9HAU5 RNU6-513P-201ENST00000516104 104 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 RN7SKP183-201ENST00000517169 324 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.4□□□□□ -1.38
UPF2Q9HAU5 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.4□□□□□ -1.38
UPF2Q9HAU5 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AC127381.1-201ENST00000555979 939 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AC026826.3-201ENST00000561747 158 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.4□□□□□ -1.38
UPF2Q9HAU5 RN7SL435P-201ENST00000584418 282 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AL591926.1-201ENST00000620542 217 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 AL683826.1-201ENST00000624104 627 ntBASIC6.4□□□□□ -1.38
UPF2Q9HAU5 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.4□□□□□ -1.39
UPF2Q9HAU5 ZNF652P1-201ENST00000442420 1309 ntBASIC6.4□□□□□ -1.39
UPF2Q9HAU5 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.4□□□□□ -1.39
UPF2Q9HAU5 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
UPF2Q9HAU5 AL672167.1-204ENST00000641875 3017 ntBASIC6.4□□□□□ -1.39
UPF2Q9HAU5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
UPF2Q9HAU5 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.4□□□□□ -1.39
UPF2Q9HAU5 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
UPF2Q9HAU5 MAPK10-320ENST00000641462 6696 ntBASIC6.39□□□□□ -1.39
UPF2Q9HAU5 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
UPF2Q9HAU5 AL390316.1-201ENST00000406279 553 ntBASIC6.39□□□□□ -1.39
UPF2Q9HAU5 RN7SKP16-201ENST00000410180 299 ntBASIC6.39□□□□□ -1.39
UPF2Q9HAU5 OR2AT2P-201ENST00000413438 905 ntBASIC6.39□□□□□ -1.39
UPF2Q9HAU5 OR5M12P-201ENST00000423388 929 ntBASIC6.39□□□□□ -1.39
UPF2Q9HAU5 SRSF1P1-201ENST00000424058 520 ntBASIC6.39□□□□□ -1.39
UPF2Q9HAU5 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.39□□□□□ -1.39
UPF2Q9HAU5 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.39□□□□□ -1.39
UPF2Q9HAU5 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.39□□□□□ -1.39
UPF2Q9HAU5 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.39□□□□□ -1.39
UPF2Q9HAU5 AC104339.1-201ENST00000465478 348 ntBASIC6.39□□□□□ -1.39
UPF2Q9HAU5 RPL7P40-201ENST00000481703 745 ntBASIC6.39□□□□□ -1.39
UPF2Q9HAU5 HMGB3P16-201ENST00000508037 287 ntBASIC6.39□□□□□ -1.39
UPF2Q9HAU5 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.39□□□□□ -1.39
UPF2Q9HAU5 AC109481.1-201ENST00000509173 282 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms