Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 Z75741.2-201ENST00000417272 1167 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AHCYP8-201ENST00000425108 209 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 C1DP1-201ENST00000426049 402 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC005189.1-201ENST00000431286 310 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 YWHAZP7-201ENST00000436906 631 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 RPS18P1-201ENST00000447840 458 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 RNU6-599P-201ENST00000459383 107 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 RNU6-1193P-201ENST00000459461 107 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 RN7SL393P-201ENST00000463588 296 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 RN7SL168P-201ENST00000463821 279 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 RN7SL83P-201ENST00000468131 297 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 RPS3AP49-201ENST00000472161 790 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC069528.1-202ENST00000482888 637 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC114324.2-202ENST00000503812 134 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC010424.1-201ENST00000506336 297 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 MTND4LP18-201ENST00000526864 291 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 SNRPCP6-201ENST00000528310 210 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AP003033.2-201ENST00000528901 805 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 MIR3915-201ENST00000578518 97 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC107993.1-201ENST00000591343 684 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 VN1R83P-201ENST00000595685 445 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC015922.4-201ENST00000612568 690 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 U6.42-201ENST00000618440 107 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 RMST_5.1-201ENST00000618704 126 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 RNU6-368P-201ENST00000620928 107 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 RNU6-538P-201ENST00000622329 107 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC015660.5-201ENST00000623238 564 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AL162377.2-201ENST00000624532 337 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC003992.1-201ENST00000635364 557 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 UGT2B24P-201ENST00000514441 1597 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC011369.2-201ENST00000624423 1567 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AL662795.2-201ENST00000624252 3706 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 NXF4-202ENST00000416098 1465 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
FOXP3Q9BZS1 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
FOXP3Q9BZS1 AC073365.1-203ENST00000641055 1992 ntBASIC6.71□□□□□ -1.33
FOXP3Q9BZS1 AC090181.3-201ENST00000624777 1514 ntBASIC6.71□□□□□ -1.33
FOXP3Q9BZS1 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
FOXP3Q9BZS1 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.71□□□□□ -1.33
FOXP3Q9BZS1 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.71□□□□□ -1.33
FOXP3Q9BZS1 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 AC004074.1-201ENST00000421810 1063 ntBASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 AL590128.1-201ENST00000433407 286 ntBASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 AL138899.2-201ENST00000439139 499 ntBASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 OR51B8P-201ENST00000449892 769 ntBASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 AURKAPS1-201ENST00000451805 1212 ntBASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 RPL7L1P3-201ENST00000455249 689 ntBASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 RPL5P14-201ENST00000494197 878 ntBASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 AC008565.1-201ENST00000509046 885 ntBASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 AC091849.1-201ENST00000509920 121 ntBASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 OR52H2P-201ENST00000514607 902 ntBASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 RN7SKP67-201ENST00000515905 235 ntBASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 AP001000.1-201ENST00000526843 742 ntBASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 NBEAP1-201ENST00000554452 979 ntBASIC6.71□□□□□ -1.34
FOXP3Q9BZS1 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms