Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AC020658.2-201ENST00000559030 4020 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 RN7SKP237-201ENST00000364663 301 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL451046.1-201ENST00000406097 534 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 RN7SKP205-201ENST00000410999 307 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL445213.1-201ENST00000412589 747 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AC066692.1-201ENST00000421721 457 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL365203.2-201ENST00000423444 196 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL009174.1-201ENST00000426577 416 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL390023.1-201ENST00000428836 262 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AC005345.1-201ENST00000431868 217 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL445567.1-201ENST00000439121 144 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL035551.1-201ENST00000446931 348 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 HMGB1P16-201ENST00000447155 540 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL133244.1-201ENST00000456007 258 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 RN7SL187P-201ENST00000495587 303 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL035404.1-201ENST00000497982 568 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AC138517.1-201ENST00000515724 568 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 OR5M6P-201ENST00000530227 937 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AC002400.1-201ENST00000569310 726 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 CTSLP2-201ENST00000580501 394 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AC036176.3-201ENST00000602456 418 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL356986.1-201ENST00000604085 341 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL451049.1-201ENST00000608672 497 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AL352984.2-202ENST00000613699 155 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 RBPJP2-201ENST00000618187 1444 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 AC140479.4-205ENST00000636339 820 ntBASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM55Q9BYV6 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 RNU6-225P-201ENST00000384613 103 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 RNA5SP176-201ENST00000390956 110 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AC116036.1-201ENST00000412199 367 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AC007435.1-201ENST00000421086 415 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 PTPN2P1-201ENST00000423212 1072 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 MTND4P20-201ENST00000424125 869 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 ZNF736P5Y-201ENST00000451173 805 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms