Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 PRR27-201ENST00000344526 3127 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AC006511.3-201ENST00000624929 1783 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AL354719.1-201ENST00000406535 843 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 RNU2-62P-201ENST00000410868 191 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 GSTA10P-201ENST00000412182 576 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 USP9YP13-201ENST00000417797 480 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AC024082.2-201ENST00000434771 238 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AC099340.1-201ENST00000475247 599 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 snoU109.5-201ENST00000516231 132 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 OR5AP1P-201ENST00000529730 940 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AP000662.1-201ENST00000530952 487 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 OR5BN1P-201ENST00000532955 829 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AC018630.1-201ENST00000541376 925 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 CYP2C60P-201ENST00000566088 139 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 PRR13P5-201ENST00000596581 442 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AC016629.2-201ENST00000597341 199 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AC009248.2-201ENST00000619826 254 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AL139089.1-201ENST00000620372 975 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AC024884.1-201ENST00000620583 399 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 RERE-203ENST00000400907 2973 ntTSL 5 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 MBP-206ENST00000397863 4800 ntTSL 3 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 RBPJP7-201ENST00000442803 1447 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 RBPJP5-201ENST00000449433 1447 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 SEC24A-202ENST00000398844 6299 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 RBBP8-205ENST00000399725 3260 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 MIR568-201ENST00000385036 95 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 SNORA3.1-201ENST00000408166 111 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC009161.1-201ENST00000417306 376 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AL592293.2-201ENST00000422292 996 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AL354707.3-201ENST00000427308 331 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 SDHCP3-201ENST00000445371 506 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC097463.1-201ENST00000447288 481 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 OR7A15P-201ENST00000449848 1009 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 DNAJB5P1-201ENST00000454004 806 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 RPS26P11-201ENST00000463445 348 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 RPS26P6-201ENST00000475156 348 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 RAD51AP1P1-201ENST00000484195 1001 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 CCDC11P1-201ENST00000503137 1162 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 NIFKP7-201ENST00000503365 834 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 PABPC1P1-201ENST00000506347 591 ntBASIC7.28□□□□□ -1.24
COL25A1Q9BXS0 GAPDHP61-201ENST00000507324 1005 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms