Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
COL21A1Q96P44 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL21A1Q96P44 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL21A1Q96P44 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.09□□□□□ -1.6
COL21A1Q96P44 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
COL21A1Q96P44 AC008079.2-201ENST00000623543 20396 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL21A1Q96P44 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL21A1Q96P44 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL21A1Q96P44 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL21A1Q96P44 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL21A1Q96P44 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 RNA5SP319-201ENST00000362768 119 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 SNORA48.4-201ENST00000391089 134 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 AL513325.1-201ENST00000417716 1034 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 RPL7AP49-201ENST00000429522 581 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL21A1Q96P44 AL591438.1-201ENST00000433508 581 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 AC013410.1-201ENST00000436223 1232 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 AL391987.1-201ENST00000441025 200 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 RN7SL51P-201ENST00000468230 285 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 AC023424.1-201ENST00000496058 459 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 IGBP1P4-201ENST00000503202 879 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 HMGN1P9-201ENST00000515212 298 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 AP000769.2-201ENST00000602344 396 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL21A1Q96P44 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 SAMMSON-227ENST00000642114 1199 ntBASIC5.08□□□□□ -1.6
COL21A1Q96P44 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL21A1Q96P44 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL21A1Q96P44 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL21A1Q96P44 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
COL21A1Q96P44 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL21A1Q96P44 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL21A1Q96P44 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL21A1Q96P44 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL21A1Q96P44 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL21A1Q96P44 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL21A1Q96P44 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL21A1Q96P44 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL21A1Q96P44 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL21A1Q96P44 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 AC027279.1-201ENST00000568885 4284 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 MIR143-201ENST00000385300 106 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL21A1Q96P44 AL391422.1-201ENST00000402155 436 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 AL512422.1-201ENST00000407033 553 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 COX5BP7-201ENST00000414780 274 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 AL390119.1-201ENST00000440329 312 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 AC114982.2-201ENST00000461396 358 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 AP000797.2-201ENST00000475768 606 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 RN7SL214P-201ENST00000487317 265 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 AL136038.1-201ENST00000497246 351 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 SCARNA20.4-201ENST00000516969 131 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 CDC42P3-201ENST00000518493 633 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 OR8G3P-201ENST00000533406 921 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 AC040958.1-201ENST00000561102 201 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 AC011445.2-201ENST00000599274 173 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 AL589674.2-201ENST00000604304 337 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.07□□□□□ -1.6
COL21A1Q96P44 MIR4302-201ENST00000638058 60 ntBASIC5.07□□□□□ -1.6
COL21A1Q96P44 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms