Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AK4P4-201ENST00000419465 646 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC066692.1-201ENST00000421721 457 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 RPSAP37-201ENST00000470913 821 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC010460.2-201ENST00000509054 677 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 MTCO3P27-201ENST00000514397 196 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 RN7SKP70-201ENST00000516655 271 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC060775.1-201ENST00000518241 520 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 HMGN2P36-201ENST00000529541 409 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC068305.2-201ENST00000550567 1205 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AL158211.1-201ENST00000566763 763 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AL499605.1-201ENST00000604628 403 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AP003476.1-201ENST00000623984 516 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC004808.1-201ENST00000627671 721 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 TMEM30CP-203ENST00000637814 1035 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 WDR95P-201ENST00000425638 1542 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 MIR122-201ENST00000385044 85 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 MIR1203-201ENST00000408812 85 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 MRPL53P1-201ENST00000414323 319 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 AL035660.1-201ENST00000422041 222 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 DSTNP5-201ENST00000427921 523 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 BX323845.3-201ENST00000428215 527 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 HLA-DPA3-207ENST00000454398 229 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 RPL12P39-201ENST00000455456 496 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 SNRPCP3-201ENST00000474888 476 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 AC108729.1-201ENST00000487812 947 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 PFN1P8-201ENST00000497012 543 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 PSMA2P2-201ENST00000504319 686 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 ST13P12-201ENST00000508958 1094 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 TRIM77BP-201ENST00000524985 1119 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 OR8X1P-201ENST00000534542 869 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 CD24P2-201ENST00000565486 219 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 AC060780.2-201ENST00000589047 198 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 AP004372.1-201ENST00000604842 844 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 AC034236.3-201ENST00000605999 461 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 OR4G3P-201ENST00000633500 913 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 AC099654.8-201ENST00000637757 681 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 AL158152.1-201ENST00000602652 1435 ntBASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.49□□□□□ -1.37
CDK5RAP3Q96JB5 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms