Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AP000797.2-201ENST00000475768 606 ntBASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 AC079841.1-201ENST00000481228 950 ntBASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 AC105036.1-201ENST00000566222 271 ntBASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 OR7E18P-201ENST00000592589 702 ntBASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 AC009027.1-201ENST00000604510 479 ntBASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 AC073869.7-201ENST00000640874 297 ntBASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 AC006484.1-201ENST00000435086 1884 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AC079298.1-201ENST00000625026 1619 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 MIR223-201ENST00000385204 110 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AL136455.1-201ENST00000441083 1240 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 TAAR4P-201ENST00000454843 1039 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 CBX1P5-201ENST00000475330 559 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 RN7SL799P-201ENST00000475891 298 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 RN7SL222P-201ENST00000476452 299 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 RPL7P40-201ENST00000481703 745 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AC072052.1-201ENST00000496556 306 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 RPS24P16-201ENST00000497294 392 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 IGBP1P4-201ENST00000503202 879 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AC097486.1-201ENST00000515331 210 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 OR4A46P-201ENST00000527255 933 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AC127381.1-201ENST00000555979 939 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AC126915.2-201ENST00000610957 190 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 AC010809.3-201ENST00000621310 641 ntBASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ECHDC3Q96DC8 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
ECHDC3Q96DC8 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
ECHDC3Q96DC8 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 AL139148.1-201ENST00000427122 680 ntBASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 RPL5P2-201ENST00000429598 854 ntBASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 AC016772.1-201ENST00000444170 1261 ntBASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 MED28P3-201ENST00000444288 531 ntBASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 FAR2P1-206ENST00000449736 709 ntBASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 DNAJB5P1-201ENST00000454004 806 ntBASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 AC090602.1-201ENST00000469695 252 ntBASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 AC074386.1-201ENST00000476560 767 ntBASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 RPS4XP20-201ENST00000505751 772 ntBASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 AC006499.3-201ENST00000506077 748 ntBASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 HIGD1AP14-201ENST00000507617 282 ntBASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 HMGN1P9-201ENST00000515212 298 ntBASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.33□□□□□ -1.56
ECHDC3Q96DC8 AC022360.1-201ENST00000521058 340 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms