Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 AC026741.1-201ENST00000605892 482 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 AL035661.1-201ENST00000620459 1144 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 AL645568.2-201ENST00000432815 1337 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHFQ7M4L6 AC117409.1-201ENST00000470499 1310 ntBASIC5.17□□□□□ -1.58
SHFQ7M4L6 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SHFQ7M4L6 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC007938.2-201ENST00000604666 2634 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AL359715.4-201ENST00000606629 1436 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AL360270.2-201ENST00000562952 5985 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC068870.1-201ENST00000563737 2455 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 MTHFD2P5-201ENST00000320415 844 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 SELENOWP1-201ENST00000322792 252 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 MIR16-2-201ENST00000362117 81 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 RNA5SP326-201ENST00000363209 110 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 RNU1-136P-201ENST00000384181 164 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 MIR191-201ENST00000384873 92 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 RN7SKP146-201ENST00000410242 334 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC096921.1-201ENST00000411661 375 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 RPL35AP3-201ENST00000414680 288 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC079809.1-201ENST00000415468 276 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AL034379.1-201ENST00000423216 253 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC073310.1-201ENST00000423226 1033 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC108479.1-201ENST00000431142 427 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 DEFA9P-201ENST00000433042 285 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AL138787.1-202ENST00000437804 898 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 RN7SL269P-201ENST00000467795 305 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 DUTP1-201ENST00000493631 470 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 SUMO1P1-201ENST00000497904 306 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC021146.7-201ENST00000509604 775 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 RNU5A-7P-201ENST00000515979 116 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 RNA5SP441-201ENST00000516809 88 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AP001372.4-201ENST00000524889 472 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC025918.2-201ENST00000558683 763 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC002519.2-203ENST00000567043 837 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 MIR4660-201ENST00000583549 74 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC018754.1-201ENST00000607486 925 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AP000864.1-201ENST00000609424 650 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 MIR6823-201ENST00000622118 61 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 AC073488.6-201ENST00000632293 754 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHFQ7M4L6 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.16□□□□□ -1.58
SHFQ7M4L6 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.16□□□□□ -1.58
SHFQ7M4L6 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SHFQ7M4L6 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SHFQ7M4L6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
SHFQ7M4L6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHFQ7M4L6 RAD1P1-201ENST00000231383 813 ntBASIC5.15□□□□□ -1.59
SHFQ7M4L6 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.15□□□□□ -1.59
SHFQ7M4L6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms