Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AL359513.1-201ENST00000614364 557 ntBASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 AL035461.2-201ENST00000619201 524 ntBASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 AC211486.4-201ENST00000621495 113 ntBASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 AC092159.4-201ENST00000624944 550 ntBASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 KARSP1-201ENST00000451871 1752 ntBASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCHD4Q6ZW05 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AC217777.1-201ENST00000570034 1471 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AL355578.1-201ENST00000607405 1328 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AL022311.1-201ENST00000623726 19416 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 RNA5SP375-201ENST00000362975 119 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 RNA5SP346-201ENST00000363541 121 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 RN7SKP166-201ENST00000410812 305 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 METTL15P3-201ENST00000415522 1221 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AL449283.1-202ENST00000418249 604 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 RPS26P13-201ENST00000419030 330 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AC006065.1-201ENST00000422539 802 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 NDUFA5P10-201ENST00000432147 357 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AL022324.2-201ENST00000434827 780 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 MTCYBP29-201ENST00000436327 1006 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AL138787.1-202ENST00000437804 898 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 Z84478.1-201ENST00000438230 1219 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AL031681.1-201ENST00000443304 400 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 VN1R25P-201ENST00000443385 738 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 CXCR2P1-202ENST00000443392 1074 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 OR2L9P-201ENST00000444456 913 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AC069540.1-201ENST00000446320 988 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 Z73417.1-201ENST00000447373 778 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 ACA64.4-201ENST00000459070 127 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 RN7SL502P-201ENST00000481857 290 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 PSMA2P2-201ENST00000504319 686 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AC093816.1-201ENST00000515076 913 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 Y_RNA.710-201ENST00000516975 110 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 OR4U1P-201ENST00000554958 912 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AL356801.1-201ENST00000559320 294 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 DUXAP3-201ENST00000603616 594 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AC141002.1-201ENST00000607025 279 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 SNORA74.4-201ENST00000607595 199 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 MIR6885-201ENST00000612241 66 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 LYARP1-201ENST00000436977 1501 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 NLRP3P1-201ENST00000622303 1785 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 AL606537.1-201ENST00000607258 2011 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 CASC19-246ENST00000641625 1606 ntBASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms