Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MIR133B-201ENST00000362210 119 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 SPTLC1P2-201ENST00000407089 121 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 RPL35AP24-201ENST00000413846 330 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 SRSF1P1-201ENST00000424058 520 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 AL672138.1-201ENST00000450604 1015 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 AZGP1P2-201ENST00000454506 345 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 GAPDHP62-201ENST00000515313 990 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 RNA5SP92-201ENST00000516437 110 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 RNU6-943P-201ENST00000516960 98 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 OR5AM1P-201ENST00000532136 1032 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 MTND2P17-201ENST00000550281 688 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 AC051619.2-201ENST00000559063 397 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 AC006363.1-201ENST00000603806 463 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 AC018445.2-201ENST00000622987 260 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 SAMMSON-227ENST00000642114 1199 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 MTCO1P46-201ENST00000451639 1491 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 AC083899.1-201ENST00000454465 3819 ntBASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AC068870.3-201ENST00000625077 2536 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AP001029.2-203ENST00000589795 4910 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AC002525.1-201ENST00000624392 1622 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 SNORA16A-201ENST00000384342 137 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AL589994.1-201ENST00000404962 340 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 SNORA81-201ENST00000408493 178 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AL139148.1-201ENST00000427122 680 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 NANOGP4-201ENST00000427230 913 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 RPL12P17-201ENST00000432393 498 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 NPM1P18-201ENST00000434232 732 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 RPL12P18-201ENST00000437175 325 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AC079841.1-201ENST00000481228 950 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 RPS4XP1-201ENST00000482189 787 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 RPEP1-201ENST00000504507 658 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AC122688.1-201ENST00000541494 223 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 MIR4443-201ENST00000585052 53 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 QTRT1P1-201ENST00000604344 1078 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AL137141.1-201ENST00000624622 4836 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 AC003985.2-201ENST00000562268 1669 ntBASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
H3F3CQ6NXT2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 HSPA8P14-201ENST00000552265 1805 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms