Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SNORA51.1-201ENST00000363243 140 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC007618.1-201ENST00000366455 732 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AL592310.1-201ENST00000414330 671 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 NME1P1-201ENST00000420914 382 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 MTCYBP15-201ENST00000433123 1127 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 RPL23AP19-201ENST00000436229 369 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 ELOCP13-201ENST00000443934 329 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 RPS27AP3-201ENST00000453803 454 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 RNU7-27P-201ENST00000459281 62 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC096741.1-201ENST00000472250 846 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 PPIAP19-201ENST00000486414 492 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC079203.1-201ENST00000487972 404 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC023050.1-201ENST00000498198 304 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 PRELID3BP5-201ENST00000508612 460 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 HPRT1P1-201ENST00000509498 657 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC106872.4-201ENST00000510050 523 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 RNU6-311P-201ENST00000516224 102 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 EEF1A1P37-201ENST00000522748 715 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC007956.1-201ENST00000555623 542 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AL356801.1-201ENST00000559320 294 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC095057.3-201ENST00000567102 1157 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 MIR548Y-201ENST00000582739 110 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC006946.3-201ENST00000609791 756 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AL356863.1-201ENST00000623378 1080 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 OR6C71P-202ENST00000641886 1107 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 CCT8P1-201ENST00000413611 1657 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AC010168.2-201ENST00000562691 5428 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AC073055.1-201ENST00000456901 1621 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 ANKRD36P1-201ENST00000344424 659 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 SNORA17A-201ENST00000391185 133 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 RPL7P58-201ENST00000402913 758 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AL445213.1-201ENST00000412589 747 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AC013404.1-201ENST00000413068 249 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 HMGA1P8-201ENST00000414130 321 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 MTND4P3-201ENST00000417829 541 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AC007562.1-201ENST00000421819 517 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 CHEK2P5-201ENST00000423877 246 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 RPL12P16-201ENST00000431098 498 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AC023274.2-201ENST00000445264 521 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 PSAT1P4-201ENST00000466500 526 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AC104687.1-201ENST00000485829 412 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AC021146.5-201ENST00000503544 545 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 SNORD46.2-201ENST00000516021 102 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 RNA5SP271-201ENST00000516700 88 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 NDUFS5P6-201ENST00000529136 295 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AC244502.2-201ENST00000543361 851 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms