Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC019322.1-201ENST00000571869 389 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 FAM60CP-201ENST00000591086 664 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 MIR7155-201ENST00000615925 56 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 AL590410.1-201ENST00000617925 333 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC138907.8-201ENST00000623981 2256 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP41Q3LFD5 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 MT-RNR2-201ENST00000387347 1559 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC007938.2-201ENST00000604666 2634 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP41Q3LFD5 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP41Q3LFD5 ICE2P1-201ENST00000512800 1849 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC018809.2-201ENST00000602436 3823 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USP41Q3LFD5 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP41Q3LFD5 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USP41Q3LFD5 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP41Q3LFD5 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP41Q3LFD5 RNA5SP335-201ENST00000363817 110 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 U3.10-201ENST00000364459 214 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC005042.1-201ENST00000393397 800 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 RPL11P3-201ENST00000395256 523 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC017078.1-201ENST00000416146 368 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 AL158827.1-201ENST00000416300 391 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 RCC2P2-201ENST00000422174 918 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC073410.1-201ENST00000435125 589 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC105399.1-202ENST00000447303 205 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 RSU1P1-201ENST00000453416 441 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC008953.1-201ENST00000497334 318 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 BLZF2P-201ENST00000553776 1130 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 AL121612.2-201ENST00000612261 482 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 AP003400.6-201ENST00000624698 740 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 CASC19-222ENST00000641321 1173 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP41Q3LFD5 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP41Q3LFD5 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC009962.1-201ENST00000567327 3813 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 AC140479.2-201ENST00000421567 3130 ntBASIC5.92□□□□□ -1.46
USP41Q3LFD5 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
USP41Q3LFD5 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
USP41Q3LFD5 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.91□□□□□ -1.46
USP41Q3LFD5 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
USP41Q3LFD5 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP41Q3LFD5 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP41Q3LFD5 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.91□□□□□ -1.46
USP41Q3LFD5 RNU6-618P-201ENST00000363518 112 ntBASIC5.91□□□□□ -1.46
USP41Q3LFD5 RNU6-1331P-201ENST00000363658 106 ntBASIC5.91□□□□□ -1.46
USP41Q3LFD5 RNU6-670P-201ENST00000364312 104 ntBASIC5.91□□□□□ -1.46
USP41Q3LFD5 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP41Q3LFD5 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
USP41Q3LFD5 RNF10P1-201ENST00000418589 369 ntBASIC5.91□□□□□ -1.46
USP41Q3LFD5 RNGTTP1-201ENST00000420965 728 ntBASIC5.91□□□□□ -1.46
USP41Q3LFD5 VTI1BP4-201ENST00000427516 527 ntBASIC5.91□□□□□ -1.46
USP41Q3LFD5 AL392003.1-201ENST00000434394 243 ntBASIC5.91□□□□□ -1.46
USP41Q3LFD5 OR52B5P-201ENST00000435337 951 ntBASIC5.91□□□□□ -1.46
USP41Q3LFD5 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.91□□□□□ -1.46
USP41Q3LFD5 AC092106.1-201ENST00000444291 373 ntBASIC5.91□□□□□ -1.46
USP41Q3LFD5 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.91□□□□□ -1.46
USP41Q3LFD5 AL049829.1-201ENST00000465411 156 ntBASIC5.91□□□□□ -1.46
USP41Q3LFD5 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USP41Q3LFD5 AC016687.1-201ENST00000482574 353 ntBASIC5.91□□□□□ -1.46
USP41Q3LFD5 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.91□□□□□ -1.46
USP41Q3LFD5 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.91□□□□□ -1.46
USP41Q3LFD5 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.91□□□□□ -1.46
USP41Q3LFD5 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
USP41Q3LFD5 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.91□□□□□ -1.46
USP41Q3LFD5 DHFRP1-201ENST00000579682 559 ntBASIC5.91□□□□□ -1.46
USP41Q3LFD5 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.91□□□□□ -1.46
USP41Q3LFD5 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.91□□□□□ -1.46
USP41Q3LFD5 BNIP3P32-201ENST00000600015 554 ntBASIC5.91□□□□□ -1.46
USP41Q3LFD5 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms