Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 XKRYP4-201ENST00000414395 483 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 AL158825.1-201ENST00000414735 521 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.7□□□□□ -1.66
CX3CL1P78423 RPS4XP5-201ENST00000419038 768 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.7□□□□□ -1.66
CX3CL1P78423 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CL1P78423 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.7□□□□□ -1.66
CX3CL1P78423 AL663074.2-201ENST00000440621 479 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 XKRYP5-201ENST00000449659 483 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 RPL7P55-201ENST00000450522 746 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.7□□□□□ -1.66
CX3CL1P78423 HSPE1P22-201ENST00000456856 327 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 ATP5G1P3-201ENST00000463301 410 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CL1P78423 LSM3P4-201ENST00000502948 309 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 AC025459.1-201ENST00000504072 156 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.7□□□□□ -1.66
CX3CL1P78423 TOMM22P4-201ENST00000511318 336 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 AC010374.2-201ENST00000512933 535 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 RNA5SP340-201ENST00000517132 107 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.7□□□□□ -1.66
CX3CL1P78423 WBP1LP3-201ENST00000523033 208 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 BCAS2P1-201ENST00000528022 632 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.7□□□□□ -1.66
CX3CL1P78423 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.7□□□□□ -1.66
CX3CL1P78423 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.7□□□□□ -1.66
CX3CL1P78423 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.7□□□□□ -1.66
CX3CL1P78423 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.7□□□□□ -1.66
CX3CL1P78423 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.7□□□□□ -1.66
CX3CL1P78423 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CL1P78423 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 AC104229.1-201ENST00000561364 255 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.7□□□□□ -1.66
CX3CL1P78423 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.7□□□□□ -1.66
CX3CL1P78423 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.7□□□□□ -1.66
CX3CL1P78423 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 AC105148.1-201ENST00000604961 409 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 AL136131.3-201ENST00000607600 188 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 AC112503.2-201ENST00000609005 552 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 AC108673.3-201ENST00000609183 335 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 AL355974.3-201ENST00000617383 467 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CL1P78423 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.7□□□□□ -1.66
CX3CL1P78423 PARP4P2-201ENST00000446672 3326 ntBASIC4.7□□□□□ -1.66
CX3CL1P78423 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CL1P78423 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CL1P78423 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CL1P78423 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 MTND5P11-201ENST00000511037 1812 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CX3CL1P78423 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CX3CL1P78423 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.69□□□□□ -1.66
CX3CL1P78423 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CX3CL1P78423 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CX3CL1P78423 RN7SKP128-201ENST00000364270 303 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.69□□□□□ -1.66
CX3CL1P78423 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 VN1R12P-201ENST00000403778 876 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 AL096711.1-201ENST00000404780 554 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 AC016739.1-201ENST00000405359 345 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 MTND2P15-201ENST00000418575 892 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.69□□□□□ -1.66
CX3CL1P78423 AC099670.2-201ENST00000435130 321 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 AC110602.1-201ENST00000437414 318 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.69□□□□□ -1.66
CX3CL1P78423 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.69□□□□□ -1.66
CX3CL1P78423 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.69□□□□□ -1.66
CX3CL1P78423 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.69□□□□□ -1.66
CX3CL1P78423 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.69□□□□□ -1.66
CX3CL1P78423 GEMIN2P1-201ENST00000454246 752 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 FCF1P6-201ENST00000456841 595 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.69□□□□□ -1.66
CX3CL1P78423 SETP6-201ENST00000479329 568 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 AP002884.1-201ENST00000479691 655 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 RPL37P23-201ENST00000492641 294 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.69□□□□□ -1.66
CX3CL1P78423 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.69□□□□□ -1.66
CX3CL1P78423 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.69□□□□□ -1.66
CX3CL1P78423 AC111000.6-201ENST00000514471 709 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 SCARNA18.1-201ENST00000516330 83 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 MIR2117-201ENST00000516780 80 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 CIR1P1-201ENST00000524055 1133 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms