Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 AL591503.2-201ENST00000442314 1005 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 AC002553.3-201ENST00000453002 341 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 RPS6P2-201ENST00000454208 705 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 AC090589.1-201ENST00000473109 362 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 RPL7P16-201ENST00000479738 738 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.58□□□□□ -1.36
EPHB3P54753 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.58□□□□□ -1.36
EPHB3P54753 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.58□□□□□ -1.36
EPHB3P54753 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
EPHB3P54753 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.58□□□□□ -1.36
EPHB3P54753 RNU6-1028P-201ENST00000517164 93 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.58□□□□□ -1.36
EPHB3P54753 MTND4LP26-201ENST00000518144 282 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.58□□□□□ -1.36
EPHB3P54753 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.58□□□□□ -1.36
EPHB3P54753 BUD31P1-201ENST00000521828 359 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 OR5G4P-201ENST00000525251 760 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 OR4V1P-201ENST00000525394 1140 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.58□□□□□ -1.36
EPHB3P54753 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.58□□□□□ -1.36
EPHB3P54753 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.58□□□□□ -1.36
EPHB3P54753 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.58□□□□□ -1.36
EPHB3P54753 MTND4LP24-201ENST00000572277 291 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.58□□□□□ -1.36
EPHB3P54753 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.58□□□□□ -1.36
EPHB3P54753 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.58□□□□□ -1.36
EPHB3P54753 AC073648.5-201ENST00000603502 305 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 AC005034.4-201ENST00000603612 899 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 AL139286.2-201ENST00000606838 396 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.58□□□□□ -1.36
EPHB3P54753 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.58□□□□□ -1.36
EPHB3P54753 AL512652.1-201ENST00000619006 500 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 AC073862.4-201ENST00000622982 854 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 AC022140.2-201ENST00000623500 188 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 AC007490.1-201ENST00000624321 703 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 AL357562.1-201ENST00000624911 609 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.58□□□□□ -1.36
EPHB3P54753 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.58□□□□□ -1.36
EPHB3P54753 AC244258.1-201ENST00000637553 1071 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 ZNF663P-202ENST00000641770 1131 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
EPHB3P54753 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
EPHB3P54753 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.58□□□□□ -1.36
EPHB3P54753 AL049634.1-201ENST00000453770 1720 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
EPHB3P54753 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
EPHB3P54753 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
EPHB3P54753 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
EPHB3P54753 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
EPHB3P54753 CUBNP3-201ENST00000457461 1784 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 AC008432.1-201ENST00000615912 1320 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
EPHB3P54753 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
EPHB3P54753 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
EPHB3P54753 FAM32BP-201ENST00000344033 333 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 SNORA21-201ENST00000362423 132 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 RNU1-134P-201ENST00000362935 165 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 RNU1-49P-201ENST00000363468 159 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 RNA5SP435-201ENST00000364044 108 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 RNU6-1283P-201ENST00000365314 105 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 RNU6-481P-201ENST00000384194 107 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 RNU6-1215P-201ENST00000384441 102 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 MIR130B-202ENST00000385018 82 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 MIR323B-201ENST00000385269 82 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
EPHB3P54753 RNA5SP156-201ENST00000410250 110 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 U3.43-201ENST00000410734 213 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 HMGN1P20-201ENST00000411849 300 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.57□□□□□ -1.36
EPHB3P54753 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.57□□□□□ -1.36
EPHB3P54753 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.57□□□□□ -1.36
EPHB3P54753 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.57□□□□□ -1.36
EPHB3P54753 MTND4P28-201ENST00000426217 387 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
EPHB3P54753 AC129850.1-201ENST00000436203 508 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 AC023141.3-201ENST00000436698 278 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 ELOCP8-201ENST00000439309 332 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 AC092393.1-201ENST00000439625 742 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 ELOCP15-201ENST00000442090 332 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.57□□□□□ -1.36
EPHB3P54753 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.57□□□□□ -1.36
EPHB3P54753 AC097262.1-201ENST00000452559 548 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 RPL23AP23-201ENST00000452590 471 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.57□□□□□ -1.36
EPHB3P54753 RNU7-125P-201ENST00000458760 62 ntBASIC6.57□□□□□ -1.36
EPHB3P54753 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms