Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 SDHDP6-201ENST00000414693 480 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN9P43378 AC013410.2-201ENST00000422627 201 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 RPS29P14-201ENST00000431518 171 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 AC002504.1-201ENST00000438281 691 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 AC064862.4-201ENST00000442180 334 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN9P43378 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN9P43378 AC144530.1-201ENST00000452862 555 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 VDAC2P4-201ENST00000452925 711 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 RN7SL583P-201ENST00000475692 287 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN9P43378 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN9P43378 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN9P43378 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN9P43378 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN9P43378 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN9P43378 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN9P43378 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN9P43378 AC010487.1-201ENST00000594408 1172 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN9P43378 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN9P43378 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 AC018809.2-201ENST00000602436 3823 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 AC009237.13-201ENST00000603193 276 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 AL355802.4-201ENST00000607635 548 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 AL139124.1-201ENST00000609123 421 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 AL356608.1-201ENST00000610034 820 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN9P43378 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN9P43378 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN9P43378 AC007683.2-201ENST00000624681 714 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PTPN9P43378 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN9P43378 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.81□□□□□ -1.48
PTPN9P43378 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
PTPN9P43378 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN9P43378 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.81□□□□□ -1.48
PTPN9P43378 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN9P43378 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PTPN9P43378 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN9P43378 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN9P43378 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN9P43378 AC092451.3-201ENST00000625067 1343 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN9P43378 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN9P43378 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN9P43378 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN9P43378 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN9P43378 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN9P43378 MIR421-201ENST00000365696 85 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN9P43378 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN9P43378 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN9P43378 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PTPN9P43378 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 AL133173.1-201ENST00000423458 397 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 MTND4P24-201ENST00000424002 397 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 RPL7P56-201ENST00000429441 717 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN9P43378 ZNF965P-201ENST00000432501 817 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 OR6D1P-201ENST00000436165 939 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 AL158053.1-201ENST00000441503 453 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 IGBP1P3-201ENST00000447449 1000 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 LDHBP2-201ENST00000456969 1005 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 EIF2S2P4-201ENST00000461070 984 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 AC108751.3-201ENST00000461814 1020 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 RN7SL197P-201ENST00000466981 299 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN9P43378 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN9P43378 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.8□□□□□ -1.48
PTPN9P43378 HMGN1P15-201ENST00000513870 295 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 TRIM51DP-201ENST00000529746 596 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 CKS1BP1-201ENST00000555221 240 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN9P43378 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN9P43378 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 MRPS21P7-201ENST00000566937 238 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN9P43378 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN9P43378 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.8□□□□□ -1.48
PTPN9P43378 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN9P43378 BNIP3P19-201ENST00000605397 577 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 AC026790.2-201ENST00000606282 430 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN9P43378 AC015982.1-201ENST00000608113 465 ntBASIC5.8□□□□□ -1.48
PTPN9P43378 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms