Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AP005432.1-201ENST00000580891 3485 ntBASIC5.54□□□□□ -1.52
SLC1A1P43005 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SLC1A1P43005 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC1A1P43005 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SLC1A1P43005 MIR133B-201ENST00000362210 119 ntBASIC5.54□□□□□ -1.52
SLC1A1P43005 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SLC1A1P43005 NAP1L4P2-201ENST00000425958 899 ntBASIC5.54□□□□□ -1.52
SLC1A1P43005 MTND6P12-201ENST00000428247 522 ntBASIC5.54□□□□□ -1.52
SLC1A1P43005 CLUHP1-201ENST00000435012 1190 ntBASIC5.54□□□□□ -1.52
SLC1A1P43005 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.54□□□□□ -1.52
SLC1A1P43005 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC1A1P43005 CYCSP24-201ENST00000445119 316 ntBASIC5.54□□□□□ -1.52
SLC1A1P43005 AL161722.1-201ENST00000446972 1032 ntBASIC5.54□□□□□ -1.52
SLC1A1P43005 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.54□□□□□ -1.52
SLC1A1P43005 RPS4XP12-201ENST00000461747 709 ntBASIC5.54□□□□□ -1.52
SLC1A1P43005 RN7SL189P-201ENST00000468631 289 ntBASIC5.54□□□□□ -1.52
SLC1A1P43005 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SLC1A1P43005 EIF1P7-201ENST00000487533 337 ntBASIC5.54□□□□□ -1.52
SLC1A1P43005 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.54□□□□□ -1.52
SLC1A1P43005 AC006272.2-201ENST00000594725 163 ntBASIC5.54□□□□□ -1.52
SLC1A1P43005 AC010245.2-201ENST00000606908 1167 ntBASIC5.54□□□□□ -1.52
SLC1A1P43005 WBP1LP8-201ENST00000617401 327 ntBASIC5.54□□□□□ -1.52
SLC1A1P43005 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC1A1P43005 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.54□□□□□ -1.52
SLC1A1P43005 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.54□□□□□ -1.52
SLC1A1P43005 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC1A1P43005 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.54□□□□□ -1.52
SLC1A1P43005 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC1A1P43005 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC1A1P43005 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC1A1P43005 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SLC1A1P43005 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC1A1P43005 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC1A1P43005 AC112198.2-201ENST00000426589 6996 ntBASIC5.53□□□□□ -1.52
SLC1A1P43005 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC1A1P43005 AC073136.1-201ENST00000449426 2884 ntBASIC5.53□□□□□ -1.52
SLC1A1P43005 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC1A1P43005 RNA5SP223-201ENST00000365174 120 ntBASIC5.53□□□□□ -1.52
SLC1A1P43005 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC1A1P43005 RNU2-18P-201ENST00000411224 162 ntBASIC5.53□□□□□ -1.52
SLC1A1P43005 GABARAPL3-201ENST00000412799 354 ntBASIC5.53□□□□□ -1.52
SLC1A1P43005 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC1A1P43005 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC1A1P43005 DSTNP5-201ENST00000427921 523 ntBASIC5.53□□□□□ -1.52
SLC1A1P43005 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC1A1P43005 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC1A1P43005 AC073909.1-201ENST00000447112 999 ntBASIC5.53□□□□□ -1.52
SLC1A1P43005 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC1A1P43005 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.53□□□□□ -1.52
SLC1A1P43005 COX6B1P2-201ENST00000489624 230 ntBASIC5.53□□□□□ -1.52
SLC1A1P43005 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC1A1P43005 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC1A1P43005 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC1A1P43005 HMGB1P40-201ENST00000525121 540 ntBASIC5.53□□□□□ -1.52
SLC1A1P43005 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.53□□□□□ -1.52
SLC1A1P43005 AC135626.1-201ENST00000556983 435 ntBASIC5.53□□□□□ -1.52
SLC1A1P43005 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC1A1P43005 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC1A1P43005 FO393422.1-201ENST00000603908 708 ntBASIC5.53□□□□□ -1.52
SLC1A1P43005 AC074101.1-201ENST00000637861 241 ntBASIC5.53□□□□□ -1.52
SLC1A1P43005 AC073869.7-201ENST00000640874 297 ntBASIC5.53□□□□□ -1.52
SLC1A1P43005 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC1A1P43005 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC1A1P43005 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SLC1A1P43005 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC1A1P43005 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC1A1P43005 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC1A1P43005 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SLC1A1P43005 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC1A1P43005 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC1A1P43005 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC1A1P43005 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SLC1A1P43005 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC1A1P43005 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC1A1P43005 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SLC1A1P43005 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC1A1P43005 RNA5SP335-201ENST00000363817 110 ntBASIC5.52□□□□□ -1.53
SLC1A1P43005 RNA5SP234-201ENST00000363916 119 ntBASIC5.52□□□□□ -1.53
SLC1A1P43005 RNU1-74P-201ENST00000384108 171 ntBASIC5.52□□□□□ -1.53
SLC1A1P43005 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC1A1P43005 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC1A1P43005 AC009238.2-201ENST00000431026 355 ntBASIC5.52□□□□□ -1.53
SLC1A1P43005 AL390119.1-201ENST00000440329 312 ntBASIC5.52□□□□□ -1.53
SLC1A1P43005 AC245028.2-201ENST00000458673 253 ntBASIC5.52□□□□□ -1.53
SLC1A1P43005 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC1A1P43005 TMEM97P2-201ENST00000517841 403 ntBASIC5.52□□□□□ -1.53
SLC1A1P43005 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC1A1P43005 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC1A1P43005 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC1A1P43005 AC008814.1-201ENST00000603797 406 ntBASIC5.52□□□□□ -1.53
SLC1A1P43005 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC1A1P43005 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC1A1P43005 AL691477.1-201ENST00000624398 162 ntBASIC5.52□□□□□ -1.53
SLC1A1P43005 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC1A1P43005 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC1A1P43005 AL022322.2-201ENST00000624072 20397 ntBASIC5.52□□□□□ -1.53
SLC1A1P43005 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SLC1A1P43005 OR4G1P-202ENST00000641173 1788 ntBASIC5.52□□□□□ -1.53
SLC1A1P43005 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC1A1P43005 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms