Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXD13P35453 DBIP1-201ENST00000401435 260 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 RN7SKP293-201ENST00000411389 296 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXD13P35453 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXD13P35453 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 RSL24D1P8-201ENST00000434442 492 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 VN1R48P-201ENST00000448149 1036 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 TAAR4P-201ENST00000454843 1039 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXD13P35453 RNU6-599P-201ENST00000459383 107 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 RNU6-1193P-201ENST00000459461 107 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 EIF2S2P4-201ENST00000461070 984 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 AC090638.1-201ENST00000498296 909 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXD13P35453 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXD13P35453 AP004607.2-201ENST00000533949 322 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 AC022404.1-201ENST00000555320 273 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 AC012414.2-201ENST00000559474 187 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 AC015720.2-201ENST00000567709 334 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXD13P35453 AC010245.2-201ENST00000606908 1167 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 RNU6-368P-201ENST00000620928 107 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 RNU6-538P-201ENST00000622329 107 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXD13P35453 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXD13P35453 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXD13P35453 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXD13P35453 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXD13P35453 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXD13P35453 AP000473.2-201ENST00000602659 1537 ntBASIC5.98□□□□□ -1.45
HOXD13P35453 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXD13P35453 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HOXD13P35453 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXD13P35453 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXD13P35453 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXD13P35453 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXD13P35453 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXD13P35453 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXD13P35453 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXD13P35453 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
HOXD13P35453 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXD13P35453 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXD13P35453 RNU4-2-201ENST00000365668 141 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 RNU6-883P-201ENST00000384597 107 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 AC093084.1-201ENST00000424233 687 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 GAPDHP34-201ENST00000432112 823 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXD13P35453 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.97□□□□□ -1.45
HOXD13P35453 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXD13P35453 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXD13P35453 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXD13P35453 AC108751.3-201ENST00000461814 1020 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXD13P35453 RPSAP39-201ENST00000467439 883 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 RN7SL717P-201ENST00000478343 297 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 RN7SL466P-201ENST00000497546 295 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.97□□□□□ -1.45
HOXD13P35453 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXD13P35453 AC026782.2-201ENST00000510845 636 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 HMGB1P47-201ENST00000511281 589 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 ACTR6P1-201ENST00000514311 1104 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXD13P35453 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXD13P35453 SNRPGP1-201ENST00000553864 222 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 AC092868.3-201ENST00000560515 784 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXD13P35453 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXD13P35453 FAM106CP-201ENST00000582212 507 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 MIR4310-201ENST00000582950 57 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.97□□□□□ -1.45
HOXD13P35453 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXD13P35453 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXD13P35453 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HOXD13P35453 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXD13P35453 AC092451.3-201ENST00000625067 1343 ntBASIC5.97□□□□□ -1.45
HOXD13P35453 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.97□□□□□ -1.45
HOXD13P35453 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXD13P35453 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXD13P35453 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXD13P35453 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXD13P35453 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
HOXD13P35453 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HOXD13P35453 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXD13P35453 MIR133B-201ENST00000362210 119 ntBASIC5.96□□□□□ -1.46
HOXD13P35453 RN7SKP69-201ENST00000365390 305 ntBASIC5.96□□□□□ -1.46
HOXD13P35453 SNORA70.6-201ENST00000383934 134 ntBASIC5.96□□□□□ -1.46
HOXD13P35453 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXD13P35453 SNORA79B-201ENST00000410557 148 ntBASIC5.96□□□□□ -1.46
HOXD13P35453 MTCYBP7-201ENST00000419540 1134 ntBASIC5.96□□□□□ -1.46
HOXD13P35453 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.96□□□□□ -1.46
HOXD13P35453 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.96□□□□□ -1.46
HOXD13P35453 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXD13P35453 MRPS33P4-201ENST00000434892 317 ntBASIC5.96□□□□□ -1.46
HOXD13P35453 AC046176.1-201ENST00000435260 1170 ntBASIC5.96□□□□□ -1.46
HOXD13P35453 RPL12P11-201ENST00000439970 501 ntBASIC5.96□□□□□ -1.46
HOXD13P35453 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXD13P35453 AL513343.1-201ENST00000451818 792 ntBASIC5.96□□□□□ -1.46
HOXD13P35453 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXD13P35453 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms