Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RPA3P35244 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RPA3P35244 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RPA3P35244 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.33□□□□□ -1.56
RPA3P35244 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.33□□□□□ -1.56
RPA3P35244 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RPA3P35244 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RPA3P35244 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.33□□□□□ -1.56
RPA3P35244 RNA5SP242-201ENST00000364171 118 ntBASIC5.33□□□□□ -1.56
RPA3P35244 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RPA3P35244 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.33□□□□□ -1.56
RPA3P35244 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.33□□□□□ -1.56
RPA3P35244 AL513325.1-201ENST00000417716 1034 ntBASIC5.33□□□□□ -1.56
RPA3P35244 AC104333.2-201ENST00000422630 192 ntBASIC5.33□□□□□ -1.56
RPA3P35244 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.33□□□□□ -1.56
RPA3P35244 AC019185.1-201ENST00000442718 389 ntBASIC5.33□□□□□ -1.56
RPA3P35244 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.33□□□□□ -1.56
RPA3P35244 AC016724.1-201ENST00000453215 421 ntBASIC5.33□□□□□ -1.56
RPA3P35244 AC023141.9-201ENST00000458734 412 ntBASIC5.33□□□□□ -1.56
RPA3P35244 CBX1P5-201ENST00000475330 559 ntBASIC5.33□□□□□ -1.56
RPA3P35244 RN7SL466P-201ENST00000497546 295 ntBASIC5.33□□□□□ -1.56
RPA3P35244 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.33□□□□□ -1.56
RPA3P35244 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.33□□□□□ -1.56
RPA3P35244 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.33□□□□□ -1.56
RPA3P35244 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.33□□□□□ -1.56
RPA3P35244 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RPA3P35244 SNORD95-201ENST00000579879 68 ntBASIC5.33□□□□□ -1.56
RPA3P35244 RN7SL356P-201ENST00000582228 248 ntBASIC5.33□□□□□ -1.56
RPA3P35244 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.33□□□□□ -1.56
RPA3P35244 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.33□□□□□ -1.56
RPA3P35244 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.33□□□□□ -1.56
RPA3P35244 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RPA3P35244 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RPA3P35244 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RPA3P35244 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.33□□□□□ -1.56
RPA3P35244 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RPA3P35244 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
RPA3P35244 AL672167.1-204ENST00000641875 3017 ntBASIC5.33□□□□□ -1.56
RPA3P35244 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RPA3P35244 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RPA3P35244 AC099654.3-201ENST00000447087 1546 ntBASIC5.33□□□□□ -1.56
RPA3P35244 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RPA3P35244 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RPA3P35244 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPA3P35244 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPA3P35244 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RPA3P35244 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPA3P35244 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPA3P35244 AL603750.1-201ENST00000624216 1717 ntBASIC5.32□□□□□ -1.56
RPA3P35244 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RPA3P35244 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.32□□□□□ -1.56
RPA3P35244 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.32□□□□□ -1.56
RPA3P35244 RN7SKP124-201ENST00000364730 341 ntBASIC5.32□□□□□ -1.56
RPA3P35244 SNORA16A-201ENST00000384342 137 ntBASIC5.32□□□□□ -1.56
RPA3P35244 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.32□□□□□ -1.56
RPA3P35244 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.32□□□□□ -1.56
RPA3P35244 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.32□□□□□ -1.56
RPA3P35244 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.32□□□□□ -1.56
RPA3P35244 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.32□□□□□ -1.56
RPA3P35244 AL390119.1-201ENST00000440329 312 ntBASIC5.32□□□□□ -1.56
RPA3P35244 AL391987.1-201ENST00000441025 200 ntBASIC5.32□□□□□ -1.56
RPA3P35244 CYCSP24-201ENST00000445119 316 ntBASIC5.32□□□□□ -1.56
RPA3P35244 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RPA3P35244 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.32□□□□□ -1.56
RPA3P35244 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.32□□□□□ -1.56
RPA3P35244 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RPA3P35244 RN7SL174P-201ENST00000475578 289 ntBASIC5.32□□□□□ -1.56
RPA3P35244 RPL7P41-201ENST00000485823 957 ntBASIC5.32□□□□□ -1.56
RPA3P35244 AC022133.1-201ENST00000490961 571 ntBASIC5.32□□□□□ -1.56
RPA3P35244 RNU6-964P-201ENST00000516524 69 ntBASIC5.32□□□□□ -1.56
RPA3P35244 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.32□□□□□ -1.56
RPA3P35244 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.32□□□□□ -1.56
RPA3P35244 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.32□□□□□ -1.56
RPA3P35244 AC020978.7-201ENST00000575953 1187 ntBASIC5.32□□□□□ -1.56
RPA3P35244 AC012146.2-201ENST00000576545 416 ntBASIC5.32□□□□□ -1.56
RPA3P35244 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.32□□□□□ -1.56
RPA3P35244 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.32□□□□□ -1.56
RPA3P35244 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.32□□□□□ -1.56
RPA3P35244 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPA3P35244 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RPA3P35244 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPA3P35244 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPA3P35244 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RPA3P35244 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPA3P35244 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPA3P35244 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.32□□□□□ -1.56
RPA3P35244 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RPA3P35244 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPA3P35244 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPA3P35244 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
RPA3P35244 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.31□□□□□ -1.56
RPA3P35244 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.31□□□□□ -1.56
RPA3P35244 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.31□□□□□ -1.56
RPA3P35244 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPA3P35244 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPA3P35244 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPA3P35244 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPA3P35244 NPM1P40-201ENST00000412758 733 ntBASIC5.31□□□□□ -1.56
RPA3P35244 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.31□□□□□ -1.56
RPA3P35244 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms