Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 LSM1P2-201ENST00000604911 322 ntBASIC5.73□□□□□ -1.49
CHRNA3P32297 AC022467.1-201ENST00000614738 749 ntBASIC5.73□□□□□ -1.49
CHRNA3P32297 FRG1EP-201ENST00000634469 770 ntBASIC5.73□□□□□ -1.49
CHRNA3P32297 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CHRNA3P32297 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHRNA3P32297 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHRNA3P32297 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CHRNA3P32297 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.73□□□□□ -1.49
CHRNA3P32297 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHRNA3P32297 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.73□□□□□ -1.49
CHRNA3P32297 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.72□□□□□ -1.49
CHRNA3P32297 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHRNA3P32297 THAP12P8-201ENST00000447914 2115 ntBASIC5.72□□□□□ -1.49
CHRNA3P32297 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CHRNA3P32297 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHRNA3P32297 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CHRNA3P32297 AL391422.1-201ENST00000402155 436 ntBASIC5.72□□□□□ -1.49
CHRNA3P32297 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.72□□□□□ -1.49
CHRNA3P32297 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.72□□□□□ -1.49
CHRNA3P32297 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.72□□□□□ -1.49
CHRNA3P32297 RPL19P16-201ENST00000433839 588 ntBASIC5.72□□□□□ -1.49
CHRNA3P32297 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.72□□□□□ -1.49
CHRNA3P32297 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.72□□□□□ -1.49
CHRNA3P32297 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.72□□□□□ -1.49
CHRNA3P32297 AP000547.1-201ENST00000454360 617 ntBASIC5.72□□□□□ -1.49
CHRNA3P32297 IGBP1P4-201ENST00000503202 879 ntBASIC5.72□□□□□ -1.49
CHRNA3P32297 SCARNA20.4-201ENST00000516969 131 ntBASIC5.72□□□□□ -1.49
CHRNA3P32297 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHRNA3P32297 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.72□□□□□ -1.49
CHRNA3P32297 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CHRNA3P32297 AC130364.2-201ENST00000528639 604 ntBASIC5.72□□□□□ -1.49
CHRNA3P32297 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CHRNA3P32297 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.72□□□□□ -1.49
CHRNA3P32297 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHRNA3P32297 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.72□□□□□ -1.49
CHRNA3P32297 AC008833.1-201ENST00000611633 691 ntBASIC5.72□□□□□ -1.49
CHRNA3P32297 AC091932.2-201ENST00000623014 291 ntBASIC5.72□□□□□ -1.49
CHRNA3P32297 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CHRNA3P32297 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CHRNA3P32297 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CHRNA3P32297 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHRNA3P32297 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CHRNA3P32297 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHRNA3P32297 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHRNA3P32297 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
CHRNA3P32297 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CHRNA3P32297 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.71□□□□□ -1.49
CHRNA3P32297 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
CHRNA3P32297 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.71□□□□□ -1.5
CHRNA3P32297 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHRNA3P32297 AC011755.1-201ENST00000623763 2049 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 AP005435.3-201ENST00000531260 3198 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHRNA3P32297 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CHRNA3P32297 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CHRNA3P32297 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
CHRNA3P32297 RN7SKP160-201ENST00000363804 340 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 OR1L6-202ENST00000373684 1044 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.71□□□□□ -1.5
CHRNA3P32297 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.71□□□□□ -1.5
CHRNA3P32297 RPL12P43-201ENST00000420608 499 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHRNA3P32297 AC012075.1-201ENST00000436549 580 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 AC006335.2-201ENST00000437993 330 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 AL390119.1-201ENST00000440329 312 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 AC092106.1-201ENST00000444291 373 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CHRNA3P32297 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.71□□□□□ -1.5
CHRNA3P32297 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.71□□□□□ -1.5
CHRNA3P32297 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.71□□□□□ -1.5
CHRNA3P32297 EIF3LP3-201ENST00000495197 822 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.71□□□□□ -1.5
CHRNA3P32297 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.71□□□□□ -1.5
CHRNA3P32297 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.71□□□□□ -1.5
CHRNA3P32297 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.71□□□□□ -1.5
CHRNA3P32297 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.71□□□□□ -1.5
CHRNA3P32297 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CHRNA3P32297 HMGN1P9-201ENST00000515212 298 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 SNORA70.11-201ENST00000515987 138 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 SNORA70.13-201ENST00000516116 138 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 SCARNA21.2-201ENST00000516600 166 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.71□□□□□ -1.5
CHRNA3P32297 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.71□□□□□ -1.5
CHRNA3P32297 AC007225.2-201ENST00000562529 256 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 MRPS21P7-201ENST00000566937 238 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 ADAM3B-201ENST00000569937 840 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 MTCYBP13-201ENST00000578634 1093 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.71□□□□□ -1.5
CHRNA3P32297 MIR3176-201ENST00000582210 90 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.71□□□□□ -1.5
CHRNA3P32297 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHRNA3P32297 SNORA35B-201ENST00000607417 129 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.71□□□□□ -1.5
CHRNA3P32297 AC025574.2-201ENST00000615621 514 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
CHRNA3P32297 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.71□□□□□ -1.5
CHRNA3P32297 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.71□□□□□ -1.5
CHRNA3P32297 AC073869.8-201ENST00000641806 335 ntBASIC5.71□□□□□ -1.5
CHRNA3P32297 AC003973.3-201ENST00000624863 2822 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms