Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC011445.2-201ENST00000599274 173 ntBASIC5.24□□□□□ -1.57
PTPN6P29350 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.24□□□□□ -1.57
PTPN6P29350 AC025574.2-201ENST00000615621 514 ntBASIC5.24□□□□□ -1.57
PTPN6P29350 AC243960.7-201ENST00000623532 707 ntBASIC5.24□□□□□ -1.57
PTPN6P29350 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.24□□□□□ -1.57
PTPN6P29350 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.24□□□□□ -1.57
PTPN6P29350 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTPN6P29350 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTPN6P29350 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTPN6P29350 AC004158.1-201ENST00000564508 4319 ntBASIC5.24□□□□□ -1.57
PTPN6P29350 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTPN6P29350 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PTPN6P29350 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTPN6P29350 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PTPN6P29350 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTPN6P29350 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN6P29350 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN6P29350 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN6P29350 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN6P29350 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.23□□□□□ -1.57
PTPN6P29350 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
PTPN6P29350 LINC01963-201ENST00000562038 3148 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN6P29350 RN7SKP81-201ENST00000365603 331 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 AC005522.1-201ENST00000395416 346 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 HMGB3P7-201ENST00000400214 611 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 AL009179.1-201ENST00000406085 265 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 AL512422.1-201ENST00000407033 553 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 RNA5SP178-201ENST00000410380 128 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN6P29350 SETP10-201ENST00000424368 814 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN6P29350 VTI1BP4-201ENST00000427516 527 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN6P29350 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN6P29350 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN6P29350 AC090804.1-201ENST00000448870 490 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN6P29350 RN7SL101P-201ENST00000496350 279 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN6P29350 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN6P29350 AC021193.1-201ENST00000511607 420 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 MRPS16P1-201ENST00000523462 412 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN6P29350 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN6P29350 OR11H3P-201ENST00000554547 982 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN6P29350 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN6P29350 MIR4675-201ENST00000577898 77 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN6P29350 AC108738.1-201ENST00000603703 237 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 AL022394.1-201ENST00000606979 292 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN6P29350 RNA5SP440-201ENST00000612665 119 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 AL122125.1-201ENST00000616999 600 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 AC135068.5-201ENST00000624197 983 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN6P29350 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PTPN6P29350 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN6P29350 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.23□□□□□ -1.57
PTPN6P29350 MRE11P1-201ENST00000464884 2127 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN6P29350 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN6P29350 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.23□□□□□ -1.57
PTPN6P29350 AC002525.1-201ENST00000624392 1622 ntBASIC5.23□□□□□ -1.57
PTPN6P29350 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PTPN6P29350 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN6P29350 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN6P29350 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN6P29350 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN6P29350 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.22□□□□□ -1.57
PTPN6P29350 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.22□□□□□ -1.57
PTPN6P29350 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PTPN6P29350 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PTPN6P29350 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PTPN6P29350 AC003985.2-201ENST00000562268 1669 ntBASIC5.22□□□□□ -1.57
PTPN6P29350 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN6P29350 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN6P29350 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN6P29350 RNA5SP46-201ENST00000362370 120 ntBASIC5.22□□□□□ -1.57
PTPN6P29350 RNU1-146P-201ENST00000364015 165 ntBASIC5.22□□□□□ -1.57
PTPN6P29350 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PTPN6P29350 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.22□□□□□ -1.57
PTPN6P29350 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.22□□□□□ -1.57
PTPN6P29350 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.22□□□□□ -1.57
PTPN6P29350 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.22□□□□□ -1.57
PTPN6P29350 AL035090.1-201ENST00000454835 332 ntBASIC5.22□□□□□ -1.57
PTPN6P29350 RPS27AP2-201ENST00000457576 465 ntBASIC5.22□□□□□ -1.57
PTPN6P29350 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.22□□□□□ -1.57
PTPN6P29350 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.22□□□□□ -1.57
PTPN6P29350 RNU6-615P-201ENST00000516065 106 ntBASIC5.22□□□□□ -1.57
PTPN6P29350 SCARNA20.4-201ENST00000516969 131 ntBASIC5.22□□□□□ -1.57
PTPN6P29350 TMEM97P2-201ENST00000517841 403 ntBASIC5.22□□□□□ -1.57
PTPN6P29350 AC008676.3-201ENST00000521237 435 ntBASIC5.22□□□□□ -1.57
PTPN6P29350 IGBP1P1-201ENST00000554337 1009 ntBASIC5.22□□□□□ -1.57
PTPN6P29350 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.22□□□□□ -1.57
PTPN6P29350 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.22□□□□□ -1.57
PTPN6P29350 AC019322.1-201ENST00000571869 389 ntBASIC5.22□□□□□ -1.57
PTPN6P29350 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms