Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.68□□□□□ -1.5
EPHA3P29320 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EPHA3P29320 AL161912.4-201ENST00000623889 2468 ntBASIC5.68□□□□□ -1.5
EPHA3P29320 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EPHA3P29320 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
EPHA3P29320 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.67□□□□□ -1.5
EPHA3P29320 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 Z95114.1-201ENST00000624264 14574 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.67□□□□□ -1.5
EPHA3P29320 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
EPHA3P29320 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
EPHA3P29320 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 BCORP1-203ENST00000513194 5093 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
EPHA3P29320 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 SNORD56.4-201ENST00000363883 71 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 MIR551B-201ENST00000384984 96 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 AL603865.2-201ENST00000401679 213 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 AL139805.1-201ENST00000407837 289 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 BMS1P13-201ENST00000417301 885 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.67□□□□□ -1.5
EPHA3P29320 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.67□□□□□ -1.5
EPHA3P29320 AC092601.1-201ENST00000444526 383 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 AC069540.1-201ENST00000446320 988 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 FTLP8-201ENST00000446770 267 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 CYCSP42-201ENST00000450823 238 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 HMGB1P5-202ENST00000451497 985 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 RPL12P30-201ENST00000488389 499 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 HPRT1P1-201ENST00000509498 657 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 UGT2A3P7-201ENST00000510485 734 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.67□□□□□ -1.5
EPHA3P29320 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.67□□□□□ -1.5
EPHA3P29320 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.67□□□□□ -1.5
EPHA3P29320 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.67□□□□□ -1.5
EPHA3P29320 GARSP1-201ENST00000570895 719 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 AC019322.1-201ENST00000571869 389 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 AC012254.4-201ENST00000588843 273 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.67□□□□□ -1.5
EPHA3P29320 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 HIRAP1-201ENST00000605318 787 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 AL359513.1-201ENST00000614364 557 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 AC244100.4-201ENST00000617747 388 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 AC005899.6-201ENST00000620729 297 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 AC068057.2-201ENST00000624047 895 ntBASIC5.67□□□□□ -1.5
EPHA3P29320 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
EPHA3P29320 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHA3P29320 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.66□□□□□ -1.5
EPHA3P29320 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
EPHA3P29320 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
EPHA3P29320 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
EPHA3P29320 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 HSPD1P11-201ENST00000508643 1702 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
EPHA3P29320 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.66□□□□□ -1.5
EPHA3P29320 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 RNU1-134P-201ENST00000362935 165 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 SNORA64.3-201ENST00000365647 134 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHA3P29320 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.66□□□□□ -1.5
EPHA3P29320 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.66□□□□□ -1.5
EPHA3P29320 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 MTATP6P20-201ENST00000414147 562 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 HIGD1AP15-201ENST00000416198 280 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 RPS4XP5-201ENST00000419038 768 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.66□□□□□ -1.5
EPHA3P29320 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 RPSAP65-201ENST00000429660 595 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms