Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRT3P12035 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRT3P12035 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KRT3P12035 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRT3P12035 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRT3P12035 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KRT3P12035 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRT3P12035 RN7SKP124-201ENST00000364730 341 ntBASIC5.68□□□□□ -1.5
KRT3P12035 DBIP1-201ENST00000401435 260 ntBASIC5.68□□□□□ -1.5
KRT3P12035 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
KRT3P12035 PRUNEP1-201ENST00000425846 705 ntBASIC5.68□□□□□ -1.5
KRT3P12035 AC017019.1-201ENST00000426129 261 ntBASIC5.68□□□□□ -1.5
KRT3P12035 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRT3P12035 GSTM5P1-201ENST00000434751 660 ntBASIC5.68□□□□□ -1.5
KRT3P12035 SEPT7P3-201ENST00000455017 621 ntBASIC5.68□□□□□ -1.5
KRT3P12035 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KRT3P12035 AC104849.1-201ENST00000462623 405 ntBASIC5.68□□□□□ -1.5
KRT3P12035 AP000797.2-201ENST00000475768 606 ntBASIC5.68□□□□□ -1.5
KRT3P12035 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.68□□□□□ -1.5
KRT3P12035 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.68□□□□□ -1.5
KRT3P12035 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.68□□□□□ -1.5
KRT3P12035 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.68□□□□□ -1.5
KRT3P12035 MTND2P17-201ENST00000550281 688 ntBASIC5.68□□□□□ -1.5
KRT3P12035 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.68□□□□□ -1.5
KRT3P12035 AC104695.2-201ENST00000605056 775 ntBASIC5.68□□□□□ -1.5
KRT3P12035 AC010245.2-201ENST00000606908 1167 ntBASIC5.68□□□□□ -1.5
KRT3P12035 OR51C1P-201ENST00000608504 942 ntBASIC5.68□□□□□ -1.5
KRT3P12035 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.68□□□□□ -1.5
KRT3P12035 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.68□□□□□ -1.5
KRT3P12035 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
KRT3P12035 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRT3P12035 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.68□□□□□ -1.5
KRT3P12035 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
KRT3P12035 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRT3P12035 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRT3P12035 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
KRT3P12035 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRT3P12035 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRT3P12035 AC083843.2-201ENST00000568248 6253 ntBASIC5.68□□□□□ -1.5
KRT3P12035 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRT3P12035 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.67□□□□□ -1.5
KRT3P12035 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRT3P12035 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRT3P12035 OR56A4-201ENST00000330728 1209 ntBASIC5.67□□□□□ -1.5
KRT3P12035 AL391422.1-201ENST00000402155 436 ntBASIC5.67□□□□□ -1.5
KRT3P12035 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.67□□□□□ -1.5
KRT3P12035 RNA5SP178-201ENST00000410380 128 ntBASIC5.67□□□□□ -1.5
KRT3P12035 RN7SKP293-201ENST00000411389 296 ntBASIC5.67□□□□□ -1.5
KRT3P12035 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.67□□□□□ -1.5
KRT3P12035 AC012075.1-201ENST00000436549 580 ntBASIC5.67□□□□□ -1.5
KRT3P12035 AC016772.1-201ENST00000444170 1261 ntBASIC5.67□□□□□ -1.5
KRT3P12035 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.67□□□□□ -1.5
KRT3P12035 RANP1-206ENST00000455094 651 ntBASIC5.67□□□□□ -1.5
KRT3P12035 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.67□□□□□ -1.5
KRT3P12035 KCTD9P6-201ENST00000522306 950 ntBASIC5.67□□□□□ -1.5
KRT3P12035 AP004607.2-201ENST00000533949 322 ntBASIC5.67□□□□□ -1.5
KRT3P12035 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
KRT3P12035 AC027544.3-201ENST00000535082 757 ntBASIC5.67□□□□□ -1.5
KRT3P12035 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.67□□□□□ -1.5
KRT3P12035 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.67□□□□□ -1.5
KRT3P12035 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.67□□□□□ -1.5
KRT3P12035 AC005341.1-201ENST00000571086 708 ntBASIC5.67□□□□□ -1.5
KRT3P12035 RN7SL356P-201ENST00000582228 248 ntBASIC5.67□□□□□ -1.5
KRT3P12035 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.67□□□□□ -1.5
KRT3P12035 AC079791.1-201ENST00000605356 973 ntBASIC5.67□□□□□ -1.5
KRT3P12035 AL451049.1-201ENST00000608672 497 ntBASIC5.67□□□□□ -1.5
KRT3P12035 AC000068.2-201ENST00000608816 460 ntBASIC5.67□□□□□ -1.5
KRT3P12035 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.67□□□□□ -1.5
KRT3P12035 AC109583.2-201ENST00000617367 129 ntBASIC5.67□□□□□ -1.5
KRT3P12035 AC099654.6-201ENST00000636487 512 ntBASIC5.67□□□□□ -1.5
KRT3P12035 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
KRT3P12035 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
KRT3P12035 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
KRT3P12035 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.67□□□□□ -1.5
KRT3P12035 AP001029.2-203ENST00000589795 4910 ntBASIC5.67□□□□□ -1.5
KRT3P12035 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRT3P12035 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRT3P12035 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
KRT3P12035 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRT3P12035 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 AC079298.1-201ENST00000625026 1619 ntBASIC5.66□□□□□ -1.5
KRT3P12035 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
KRT3P12035 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
KRT3P12035 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
KRT3P12035 MAPK10-338ENST00000641647 3362 ntBASIC5.66□□□□□ -1.5
KRT3P12035 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
KRT3P12035 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
KRT3P12035 AL078621.3-201ENST00000623707 2042 ntBASIC5.66□□□□□ -1.5
KRT3P12035 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 RNA5SP234-201ENST00000363916 119 ntBASIC5.66□□□□□ -1.5
KRT3P12035 SNORA17A-201ENST00000391185 133 ntBASIC5.66□□□□□ -1.5
KRT3P12035 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.66□□□□□ -1.5
KRT3P12035 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms