Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
SLC28A1O00337 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
SLC28A1O00337 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SLC28A1O00337 AC097063.1-201ENST00000426714 1797 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 AL022322.2-201ENST00000624072 20397 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SLC28A1O00337 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SLC28A1O00337 YES1P1-201ENST00000418510 1628 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 AC079298.1-201ENST00000625026 1619 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 AC092376.2-201ENST00000622621 4116 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC28A1O00337 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC28A1O00337 U3.7-201ENST00000363668 216 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC28A1O00337 RNU2-22P-201ENST00000411266 212 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC28A1O00337 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.23□□□□□ -1.57
SLC28A1O00337 AC244453.4-201ENST00000419150 388 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC28A1O00337 AL133173.1-201ENST00000423458 397 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC28A1O00337 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC28A1O00337 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC28A1O00337 Z85994.2-201ENST00000434327 452 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC28A1O00337 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC28A1O00337 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC28A1O00337 RAB28P3-201ENST00000448325 597 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 GAPDHP14-201ENST00000450472 937 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 HLA-DPA3-207ENST00000454398 229 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SLC28A1O00337 LDHBP2-201ENST00000456969 1005 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 RN7SL170P-201ENST00000487098 295 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 AC016559.2-201ENST00000510759 359 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 MTND6P2-201ENST00000512226 524 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC28A1O00337 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC28A1O00337 RNU6-319P-201ENST00000516025 108 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 RNU6-751P-201ENST00000516382 101 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 RNA5SP230-201ENST00000517039 122 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 AC022360.1-201ENST00000521058 340 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC28A1O00337 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
SLC28A1O00337 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC28A1O00337 RBM22P12-201ENST00000567098 1255 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC28A1O00337 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC28A1O00337 AP000769.2-201ENST00000602344 396 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 BNIP3P7-201ENST00000605641 516 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC28A1O00337 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC28A1O00337 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC28A1O00337 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.23□□□□□ -1.57
SLC28A1O00337 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC28A1O00337 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC28A1O00337 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC28A1O00337 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SLC28A1O00337 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
SLC28A1O00337 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC28A1O00337 MAPK10-328ENST00000641553 4009 ntBASIC5.23□□□□□ -1.57
SLC28A1O00337 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC28A1O00337 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC28A1O00337 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SLC28A1O00337 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SLC28A1O00337 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC28A1O00337 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC28A1O00337 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC28A1O00337 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC28A1O00337 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC28A1O00337 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
SLC28A1O00337 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC28A1O00337 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC28A1O00337 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SLC28A1O00337 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
SLC28A1O00337 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC28A1O00337 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC28A1O00337 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC28A1O00337 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC28A1O00337 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC28A1O00337 RNU4-2-201ENST00000365668 141 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC28A1O00337 TRIM60P17-201ENST00000415181 719 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 AL121878.1-201ENST00000418638 859 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC28A1O00337 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC28A1O00337 AC090018.1-201ENST00000434369 367 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 XKRYP6-201ENST00000440468 1116 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 XKRYP3-201ENST00000442113 1116 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC28A1O00337 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC28A1O00337 RN7SL168P-201ENST00000463821 279 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms