Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RNU1-19P-201ENST00000363306 165 ntBASIC5□□□□□ -1.61
UPK1AO00322 RNA5SP335-201ENST00000363817 110 ntBASIC5□□□□□ -1.61
UPK1AO00322 OR4K12P-201ENST00000406538 961 ntBASIC5□□□□□ -1.61
UPK1AO00322 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5□□□□□ -1.61
UPK1AO00322 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5□□□□□ -1.61
UPK1AO00322 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5□□□□□ -1.61
UPK1AO00322 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5□□□□□ -1.61
UPK1AO00322 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5□□□□□ -1.61
UPK1AO00322 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5□□□□□ -1.61
UPK1AO00322 NOP56P2-201ENST00000447491 769 ntBASIC5□□□□□ -1.61
UPK1AO00322 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5□□□□□ -1.61
UPK1AO00322 BTF3P6-201ENST00000448054 499 ntBASIC5□□□□□ -1.61
UPK1AO00322 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5□□□□□ -1.61
UPK1AO00322 RPSAP39-201ENST00000467439 883 ntBASIC5□□□□□ -1.61
UPK1AO00322 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5□□□□□ -1.61
UPK1AO00322 UGT2A3P7-201ENST00000510485 734 ntBASIC5□□□□□ -1.61
UPK1AO00322 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5□□□□□ -1.61
UPK1AO00322 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5□□□□□ -1.61
UPK1AO00322 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5□□□□□ -1.61
UPK1AO00322 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5□□□□□ -1.61
UPK1AO00322 OOSP1P2-201ENST00000579644 351 ntBASIC5□□□□□ -1.61
UPK1AO00322 SNORD95-201ENST00000579879 68 ntBASIC5□□□□□ -1.61
UPK1AO00322 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5□□□□□ -1.61
UPK1AO00322 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5□□□□□ -1.61
UPK1AO00322 AL589674.2-201ENST00000604304 337 ntBASIC5□□□□□ -1.61
UPK1AO00322 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
UPK1AO00322 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
UPK1AO00322 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
UPK1AO00322 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
UPK1AO00322 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
UPK1AO00322 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
UPK1AO00322 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
UPK1AO00322 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5□□□□□ -1.61
UPK1AO00322 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5□□□□□ -1.61
UPK1AO00322 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
UPK1AO00322 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
UPK1AO00322 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5□□□□□ -1.61
UPK1AO00322 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5□□□□□ -1.61
UPK1AO00322 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
UPK1AO00322 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UPK1AO00322 MRRFP1-201ENST00000435941 1675 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
UPK1AO00322 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
UPK1AO00322 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.99□□□□□ -1.61
UPK1AO00322 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UPK1AO00322 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UPK1AO00322 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
UPK1AO00322 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
UPK1AO00322 TET1P1-201ENST00000426627 2301 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
UPK1AO00322 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
UPK1AO00322 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.99□□□□□ -1.61
UPK1AO00322 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UPK1AO00322 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.99□□□□□ -1.61
UPK1AO00322 DSTNP5-201ENST00000427921 523 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.99□□□□□ -1.61
UPK1AO00322 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.99□□□□□ -1.61
UPK1AO00322 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.99□□□□□ -1.61
UPK1AO00322 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.99□□□□□ -1.61
UPK1AO00322 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.99□□□□□ -1.61
UPK1AO00322 SETP20-201ENST00000457046 852 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 TPT1P1-201ENST00000458495 518 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.99□□□□□ -1.61
UPK1AO00322 CBX1P5-201ENST00000475330 559 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 RN7SL547P-201ENST00000490793 290 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.99□□□□□ -1.61
UPK1AO00322 OR8A2P-201ENST00000528631 952 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 YWHABP2-201ENST00000540201 713 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 AC068993.1-201ENST00000546724 589 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC4.99□□□□□ -1.61
UPK1AO00322 AC006349.1-201ENST00000555526 235 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 RBM22P1-201ENST00000578589 1214 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 MIR4472-2-201ENST00000582069 67 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.99□□□□□ -1.61
UPK1AO00322 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.99□□□□□ -1.61
UPK1AO00322 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.99□□□□□ -1.61
UPK1AO00322 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.99□□□□□ -1.61
UPK1AO00322 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
UPK1AO00322 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.99□□□□□ -1.61
UPK1AO00322 SUGT1P3-202ENST00000604259 383 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 AC004477.3-201ENST00000614061 590 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.99□□□□□ -1.61
UPK1AO00322 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.99□□□□□ -1.61
UPK1AO00322 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
UPK1AO00322 AL078595.2-201ENST00000605309 1780 ntBASIC4.99□□□□□ -1.61
UPK1AO00322 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UPK1AO00322 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.98□□□□□ -1.61
UPK1AO00322 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.98□□□□□ -1.61
UPK1AO00322 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UPK1AO00322 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UPK1AO00322 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
UPK1AO00322 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UPK1AO00322 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
UPK1AO00322 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
UPK1AO00322 RNA5SP242-201ENST00000364171 118 ntBASIC4.98□□□□□ -1.61
UPK1AO00322 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.98□□□□□ -1.61
UPK1AO00322 RNA5SP487-201ENST00000410186 122 ntBASIC4.98□□□□□ -1.61
UPK1AO00322 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.98□□□□□ -1.61
UPK1AO00322 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.98□□□□□ -1.61
UPK1AO00322 RPL12P18-201ENST00000437175 325 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms