Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 NDUFA5P11-201ENST00000567995 343 ntBASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 MIR4433B-201ENST00000581329 102 ntBASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 BNIP3P35-201ENST00000604530 490 ntBASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 RNA5SP440-201ENST00000612665 119 ntBASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 MIR6778-201ENST00000617912 73 ntBASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 AC127024.6-201ENST00000621598 424 ntBASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 CASC19-248ENST00000641674 1356 ntBASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 MIR621-201ENST00000384919 96 ntBASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 RNU1-149P-201ENST00000390870 161 ntBASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 AL390316.1-201ENST00000406279 553 ntBASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 RPS11P7-201ENST00000442125 465 ntBASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 RN7SL547P-201ENST00000490793 290 ntBASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 RN7SL447P-201ENST00000494711 245 ntBASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 RNU6-941P-201ENST00000516346 108 ntBASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 AC022404.1-201ENST00000555320 273 ntBASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 RN7SL371P-201ENST00000578099 267 ntBASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 SUGT1P3-202ENST00000604259 383 ntBASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 AC118658.2-201ENST00000618697 459 ntBASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 AC092747.4-201ENST00000620519 1861 ntBASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.7□□□□□ -1.66
TRAV27A0A087WT01 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 OR9K1P-202ENST00000641111 3217 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 OR55B1P-203ENST00000641518 2602 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 MAPK10-338ENST00000641647 3362 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 RNU1-74P-201ENST00000384108 171 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 RNA5SP339-201ENST00000390987 122 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 OR8V1P-201ENST00000395193 873 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 AL035079.1-201ENST00000405210 287 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 AL133325.1-201ENST00000421090 382 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 RPS29P14-201ENST00000431518 171 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 CYCSP24-201ENST00000445119 316 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 RPL7P45-201ENST00000455851 743 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 CYP4F35P-202ENST00000636121 390 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 AC074101.1-201ENST00000637861 241 ntBASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms