Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 HMGB1P20-201ENST00000402555 677 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AL121835.1-201ENST00000404250 354 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 PTCD2P2-201ENST00000415579 1095 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 RPS4XP5-201ENST00000419038 768 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 RNF19BPX-201ENST00000426224 625 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 MRPL50P1-201ENST00000431951 384 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 DEFA9P-201ENST00000433042 285 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 Z84478.1-201ENST00000438230 1219 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 ELOCP3-201ENST00000439303 348 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AC073909.1-201ENST00000447112 999 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AC090543.1-201ENST00000492168 485 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 RPL23AP73-201ENST00000492507 471 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 CCDC11P1-201ENST00000503137 1162 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AC008638.1-201ENST00000506035 866 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 SEC11B-201ENST00000518383 499 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AC020937.1-201ENST00000519677 1013 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 IGLV2-28-201ENST00000520681 304 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AC015802.2-201ENST00000589690 189 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AL356118.1-201ENST00000635272 1078 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 CASC19-255ENST00000641733 1385 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 AC005725.1-201ENST00000577346 2607 ntBASIC6.29□□□□□ -1.4
SSX2IPQ9Y2D8 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 THAP12P9-201ENST00000503971 2360 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 RNA5SP394-201ENST00000364216 119 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC009506.2-201ENST00000420635 840 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 ARAFP1-201ENST00000422172 605 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC127526.2-201ENST00000426436 775 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC079922.1-201ENST00000443291 359 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AL163193.1-201ENST00000444895 788 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 HMGN1P5-201ENST00000448591 263 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC112187.1-201ENST00000455837 479 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 EIF3LP3-201ENST00000495197 822 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC114322.1-201ENST00000506771 926 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC138866.2-201ENST00000508650 584 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 CYP4F27P-201ENST00000514557 494 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC097486.1-201ENST00000515331 210 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 RNU6-1334P-201ENST00000516032 105 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 RNU6-1102P-201ENST00000516149 96 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC026407.1-201ENST00000518369 204 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 IGKV2-18-201ENST00000522607 343 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 OR4V1P-201ENST00000525394 1140 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 OR4A40P-201ENST00000533878 948 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AL133247.2-201ENST00000603236 482 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms