Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 RNA5SP479-201ENST00000364858 117 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 NDUFB4P8-201ENST00000435351 367 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 RPL7P11-201ENST00000437586 658 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AL354714.3-201ENST00000447284 493 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AC093827.1-201ENST00000480094 861 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 RPL7P40-201ENST00000481703 745 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 COX6B1P5-201ENST00000509843 249 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 OR7H2P-201ENST00000513483 306 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 RN7SKP260-201ENST00000516907 149 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AC034205.1-201ENST00000520621 638 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 MIR4737-201ENST00000583979 81 ntBASIC7.81□□□□□ -1.16
SHANK2Q9UPX8 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 AC079741.1-201ENST00000321498 212 ntBASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 RNA5SP428-201ENST00000365129 132 ntBASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 AC092570.3-201ENST00000420113 693 ntBASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 AC073264.2-201ENST00000448886 166 ntBASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 RPL7P41-201ENST00000485823 957 ntBASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 AC012400.1-201ENST00000518452 381 ntBASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 IGKV2D-10-201ENST00000520194 281 ntBASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 AC021006.3-201ENST00000530771 192 ntBASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 AC068790.7-201ENST00000602347 528 ntBASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 AC010632.3-201ENST00000611377 369 ntBASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.8□□□□□ -1.16
SHANK2Q9UPX8 AC003973.3-201ENST00000624863 2822 ntBASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 AC132825.1-201ENST00000463573 2247 ntBASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 AC010168.2-201ENST00000562691 5428 ntBASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 MIR589-201ENST00000385238 99 ntBASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 HSPA8P15-201ENST00000401676 786 ntBASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 RNU4-64P-201ENST00000410795 131 ntBASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 AC099670.2-201ENST00000435130 321 ntBASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 AL356752.1-201ENST00000615844 593 ntBASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 AC135068.12-201ENST00000637370 931 ntBASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.79□□□□□ -1.16
SHANK2Q9UPX8 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.78□□□□□ -1.16
SHANK2Q9UPX8 AL449283.1-201ENST00000602631 3403 ntBASIC7.78□□□□□ -1.16
SHANK2Q9UPX8 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SHANK2Q9UPX8 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SHANK2Q9UPX8 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC7.78□□□□□ -1.16
SHANK2Q9UPX8 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC7.78□□□□□ -1.16
SHANK2Q9UPX8 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SHANK2Q9UPX8 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
SHANK2Q9UPX8 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SHANK2Q9UPX8 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SHANK2Q9UPX8 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SHANK2Q9UPX8 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SHANK2Q9UPX8 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
SHANK2Q9UPX8 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.78□□□□□ -1.16
SHANK2Q9UPX8 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms