Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AL499605.1-201ENST00000604628 403 ntBASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCNB1IP1Q9NPC3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 RNA5SP500-201ENST00000364486 119 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AC104333.2-201ENST00000422630 192 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 BX323845.3-201ENST00000428215 527 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 TRBV8-1-201ENST00000481590 279 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AC022215.1-201ENST00000481770 362 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 RN7SL570P-201ENST00000484405 292 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 OR11I1P-201ENST00000486033 954 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 KATNBL1P4-201ENST00000503545 918 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 NENFP3-201ENST00000503735 313 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AC006499.4-201ENST00000510947 694 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 RNA5SP271-201ENST00000516700 88 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AC130364.2-201ENST00000528639 604 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AP000648.1-201ENST00000529682 397 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 TRIM51DP-201ENST00000529746 596 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AC079600.1-201ENST00000550326 297 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AC096996.1-201ENST00000563813 325 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AC087468.1-201ENST00000604365 630 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AL031601.1-201ENST00000605702 394 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AC006840.1-201ENST00000623069 542 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AL390318.1-201ENST00000624564 687 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 OR8A1-204ENST00000642111 1145 ntBASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCNB1IP1Q9NPC3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 AL731532.2-201ENST00000623542 1953 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 RPL10P10-201ENST00000403509 664 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 RPS3AP2-201ENST00000407190 754 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 HMGN1P20-201ENST00000411849 300 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 AC245060.4-201ENST00000413293 1121 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 CDY17P-201ENST00000414121 1282 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 HSPE1P16-201ENST00000426640 348 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 CDY8P-201ENST00000428380 1279 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 DNAJA1P5-201ENST00000440278 943 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 HMGN1P2-201ENST00000445197 310 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 CDY20P-201ENST00000447528 1279 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 AP006222.1-205ENST00000450734 457 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 TPT1P1-201ENST00000458495 518 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 RNA5SP103-201ENST00000459503 118 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 AC094085.1-201ENST00000468914 584 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 AC098583.1-201ENST00000480875 255 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 RPL32P33-201ENST00000487023 394 ntBASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.02□□□□□ -1.61
CCNB1IP1Q9NPC3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms