Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CA10-204ENST00000570565 2276 ntTSL 5 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AL391994.1-201ENST00000254724 282 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 RNY4P24-201ENST00000362735 96 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 RNU4-21P-201ENST00000362802 126 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 Y_RNA.61-201ENST00000362835 102 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 RNU4-76P-201ENST00000364509 141 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 NPM1P4-201ENST00000414095 812 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AC006509.1-201ENST00000420788 634 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AC023128.2-201ENST00000420880 1223 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 Z99497.1-201ENST00000421282 135 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 SPATA20P1-201ENST00000423089 438 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 RPS10P21-201ENST00000430654 475 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 MTCO2P11-201ENST00000431069 680 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AC005189.1-201ENST00000431286 310 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AL590128.1-201ENST00000433407 286 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 ARAFP2-201ENST00000440565 559 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 GAPDHP20-201ENST00000444107 1007 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 ZNF619P1-201ENST00000446539 752 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 RPL35AP19-201ENST00000469425 329 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AC116337.2-201ENST00000477662 156 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 RN7SL70P-201ENST00000478322 302 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 RN7SL37P-201ENST00000490461 307 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AC079382.1-201ENST00000493346 557 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AC117522.1-201ENST00000509821 380 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 RN7SKP98-201ENST00000517070 156 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 MTCO3P15-201ENST00000526563 574 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 MED28P5-201ENST00000528254 438 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AC011260.1-201ENST00000578420 472 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AC024267.2-201ENST00000582737 417 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 FGF7P1-201ENST00000582820 288 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AL590032.1-201ENST00000604920 252 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AC073869.7-201ENST00000640874 297 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 RPS4XP5-202ENST00000449995 1334 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 AC011477.1-204ENST00000623416 1325 ntBASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSBP3Q9BWW4 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AP001157.1-201ENST00000550837 2339 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 MKI67P1-201ENST00000604297 1460 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 ZNF806-201ENST00000438300 1774 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC020978.6-201ENST00000571197 3177 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 RNU6-116P-201ENST00000384042 109 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 MIR199B-201ENST00000384849 110 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 SNORD94-201ENST00000386037 137 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms